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Gene Expression Data for Investigating Glaucoma Treatment Options and Pharmacology in the Anterior Segment, State-of-the-Art and Future Directions.用于研究青光眼治疗方案及眼前节药理学的基因表达数据:现状与未来方向
Front Neurosci. 2022 Jun 8;16:912043. doi: 10.3389/fnins.2022.912043. eCollection 2022.
2
Adenoviral reporter gene transfer to the human trabecular meshwork does not alter aqueous humor outflow. Relevance for potential gene therapy of glaucoma.腺病毒报告基因转染人小梁网不会改变房水流出。对青光眼潜在基因治疗的意义。
Gene Ther. 1999 Apr;6(4):515-24. doi: 10.1038/sj.gt.3300860.
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Molecular Damage in Glaucoma: from Anterior to Posterior Eye Segment. The MicroRNA Role.青光眼的分子损伤:从眼前节到眼后节。微小RNA的作用。
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MMPs in the trabecular meshwork: promising targets for future glaucoma therapies?小梁网中的 MMPs:未来青光眼治疗的有希望的靶点?
Invest Ophthalmol Vis Sci. 2013 Nov 21;54(12):7756-63. doi: 10.1167/iovs.13-13088.
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From DNA damage to functional changes of the trabecular meshwork in aging and glaucoma.从 DNA 损伤到衰老和青光眼中小梁网功能的变化。
Ageing Res Rev. 2016 Aug;29:26-41. doi: 10.1016/j.arr.2016.05.012. Epub 2016 May 27.
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Perfusion of his-tagged eukaryotic myocilin increases outflow resistance in human anterior segments in the presence of aqueous humor.在房水存在的情况下,灌注带有组氨酸标签的真核肌纤蛋白会增加人眼前节的流出阻力。
Invest Ophthalmol Vis Sci. 2006 Jan;47(1):213-21. doi: 10.1167/iovs.05-0334.
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Trabecular meshwork as a new target for the treatment of glaucoma.小梁网作为青光眼治疗的新靶点。
Drug News Perspect. 2006 Apr;19(3):151-8. doi: 10.1358/dnp.2006.19.3.985929.
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Recent Developments in Understanding the Role of Aqueous Humor Outflow in Normal and Primary Open Angle Glaucoma.理解房水流出在正常及原发性开角型青光眼中作用的最新进展
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The trabecular meshwork: Structure, function and clinical implications. A review of the literature.小梁网:结构、功能及临床意义。文献综述
J Fr Ophtalmol. 2020 Sep;43(7):e217-e230. doi: 10.1016/j.jfo.2020.05.002. Epub 2020 Jun 16.

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Transcription factor SP1 drives TGF-β1-induced transformation of human tenon's capsule fibroblasts by transcription activation-mediated SNAI2 upregulation.转录因子SP1通过转录激活介导的SNAI2上调驱动转化生长因子-β1诱导的人眼球筋膜囊成纤维细胞转化。
Int Ophthalmol. 2025 Jun 12;45(1):243. doi: 10.1007/s10792-025-03581-8.
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Comparison of Transcriptomic Analysis of the Conjunctiva in Glaucoma-Treated Eyes with Dry Eyes and Healthy Controls.比较青光眼治疗眼、干眼症和健康对照眼的结膜转录组分析。
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Single-cell transcriptomics of the ocular anterior segment: a comprehensive review.眼前段单细胞转录组学:全面综述。
Eye (Lond). 2023 Nov;37(16):3334-3350. doi: 10.1038/s41433-023-02539-3. Epub 2023 May 3.
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本文引用的文献

1
A multi-omics atlas of the human retina at single-cell resolution.单细胞分辨率下的人类视网膜多组学图谱。
Cell Genom. 2023 Apr 11;3(6):100298. doi: 10.1016/j.xgen.2023.100298. eCollection 2023 Jun 14.
2
Transfer learning of clinical outcomes from preclinical molecular data, principles and perspectives.从临床前分子数据转移学习临床结局:原理与展望。
Brief Bioinform. 2022 May 13;23(3). doi: 10.1093/bib/bbac133.
3
The Human Eye Transcriptome Atlas: A searchable comparative transcriptome database for healthy and diseased human eye tissue.《人类眼睛转录组图谱:一个可搜索的健康和患病人类眼组织比较转录组数据库》
Genomics. 2022 Mar;114(2):110286. doi: 10.1016/j.ygeno.2022.110286. Epub 2022 Feb 3.
4
Single-cell RNA-sequencing analysis of the ciliary epithelium and contiguous tissues in the mouse eye.单细胞 RNA 测序分析小鼠眼的纤毛上皮和相邻组织。
Exp Eye Res. 2021 Dec;213:108811. doi: 10.1016/j.exer.2021.108811. Epub 2021 Oct 28.
5
Cellular crosstalk regulates the aqueous humor outflow pathway and provides new targets for glaucoma therapies.细胞串扰调节房水流出通路,并为青光眼治疗提供新靶点。
Nat Commun. 2021 Oct 18;12(1):6072. doi: 10.1038/s41467-021-26346-0.
6
Building the mega single-cell transcriptome ocular meta-atlas.构建大型单细胞转录组眼元图谱。
Gigascience. 2021 Oct 13;10(10). doi: 10.1093/gigascience/giab061.
7
Comparison of Glaucoma-Relevant Transcriptomic Datasets Identifies Novel Drug Targets for Retinal Ganglion Cell Neuroprotection.青光眼相关转录组数据集的比较确定了视网膜神经节细胞神经保护的新药物靶点。
J Clin Med. 2021 Aug 31;10(17):3938. doi: 10.3390/jcm10173938.
8
Overexpression and Activation of αvβ3 Integrin Differentially Affects TGFβ2 Signaling in Human Trabecular Meshwork Cells.αvβ3 整联蛋白的过表达和激活可使人类小梁细胞中 TGFβ2 信号转导呈现差异化。
Cells. 2021 Jul 29;10(8):1923. doi: 10.3390/cells10081923.
9
Intraocular Pressure-Lowering Effects of Trabeculectomy Versus MicroShunt Insertion in Rabbit Eyes.兔眼小梁切除术与微管植入术降眼压效果比较。
Transl Vis Sci Technol. 2021 Aug 2;10(9):9. doi: 10.1167/tvst.10.9.9.
10
A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells.人类眼角膜单细胞图谱,定义其发育、角膜缘祖细胞及其与免疫细胞的相互作用。
Ocul Surf. 2021 Jul;21:279-298. doi: 10.1016/j.jtos.2021.03.010. Epub 2021 Apr 16.

用于研究青光眼治疗方案及眼前节药理学的基因表达数据:现状与未来方向

Gene Expression Data for Investigating Glaucoma Treatment Options and Pharmacology in the Anterior Segment, State-of-the-Art and Future Directions.

作者信息

Fuellen Georg, Jünemann Anselm

机构信息

Institute for Biostatistics and Informatics in Medicine and Aging Research, Rostock University Medical Center, Rostock, Germany.

Department of Ophthalmology, Rostock University Medical Center, Rostock, Germany.

出版信息

Front Neurosci. 2022 Jun 8;16:912043. doi: 10.3389/fnins.2022.912043. eCollection 2022.

DOI:10.3389/fnins.2022.912043
PMID:35757536
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9213806/
Abstract

Glaucoma treatment options as well as its etiology are far from understood. Gene expression (transcriptomics) data of the anterior segment of the eye can help by elucidating the molecular-mechanistic underpinnings, and we present an up-to-date description and discussion of what gene expression data are publicly available, and for which purposes these can be used. We feature the few resources covering all segments of the eye, and we then specifically focus on the anterior segment, and provide an extensive list of the Gene Expression Omnibus data that may be useful. We also feature single-cell data of relevance, particularly three datasets from tissues of relevance to aqueous humor outflow. We describe how the data have been used by researchers, by following up resource citations and data re-analyses. We discuss datasets and analyses pertaining to fibrosis following glaucoma surgery, and to glaucoma resulting from the use of steroids. We conclude by pointing out the current lack and underutilization of ocular gene expression data, and how the state of the art is expected to improve in the future.

摘要

青光眼的治疗方案及其病因仍远未被完全理解。眼部前段的基因表达(转录组学)数据有助于阐明其分子机制基础,我们将对公开可用的基因表达数据进行最新描述和讨论,并说明这些数据的用途。我们介绍了少数涵盖眼部所有部位的资源,然后特别关注前段,并提供了一份可能有用的基因表达综合数据库的详尽列表。我们还重点介绍了相关的单细胞数据,特别是来自与房水流出相关组织的三个数据集。我们通过追踪资源引用和数据重新分析,描述了研究人员如何使用这些数据。我们讨论了与青光眼手术后纤维化以及使用类固醇导致的青光眼相关的数据集和分析。最后,我们指出目前眼部基因表达数据的缺乏和未充分利用情况,以及预计未来该领域将如何取得进展。