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基于生物信息学探索骨质疏松症与多囊卵巢综合征的关系。

Exploring the relationship between osteoporosis and polycystic ovary syndrome based on bioinformatics.

机构信息

Shandong University of Traditional Chinese Medicine, Jinan, China.

Affiliated Hospital of Shandong University of Traditional Chinese Medicine, Jinan, China.

出版信息

Medicine (Baltimore). 2022 Jun 24;101(25):e29434. doi: 10.1097/MD.0000000000029434.

Abstract

BACKGROUND

In recent years, clinical studies have found that there is a close relationship between osteoporosis and polycystic ovary syndrome. However, there are few literature on the pathogenesis of osteoporosis and polycystic ovary syndrome. In order to clarify their common pathogenic mechanism and provide potential targets for drugs to regulate them at the same time, bioinformatics methods are used to explore, so as to provide a new direction for the study of the relationship between diseases in the future.

METHODS

To screen the targets of osteoporosis and polycystic ovary syndrome by Genecards, Online Mendelian Inheritance in Man databases and Therapeutic Target Database to take the intersection of the two mappings and upload the intersection targets to the STRING database to construct protein-protein interaction network; to screen the core targets by degree value and import them to Metascape database for Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis; and finally, to construct the visualization network of core targets and pathways by Cytoscape software. Ethical approval and informed consent of patients are not required because the data used in this study is publicly available and does not involve individual patient data or privacy.

RESULTS

The core targets of polycystic ovary syndrome and osteoporosis were insulin gene, insulin-like growth factor 1, CTNNB1, serine/threonine kinase 1, signal transducer and activator of transcription 3, LEP, etc. The biological processes involved include the regulation of protein phosphorylation, cell proliferation and differentiation, hormone endocrine, reproductive system and skeletal system. The related pathways were concentrated in Foxo signaling pathway, HTLV-I infection, PI3K-AKT signaling pathway, MAPK signaling pathway and AGE-RAGE signaling pathway in diabetic complications.

CONCLUSIONS

There is a close relationship between osteoporosis and polycystic ovary syndrome in terms of target and molecular mechanism. This study used bioinformatics to clarify their targets and mechanisms, providing potential targets for drugs to regulate both diseases simultaneously and providing new directions to explore the relationship between the diseases.

摘要

背景

近年来,临床研究发现骨质疏松症与多囊卵巢综合征之间存在密切关系。然而,关于骨质疏松症和多囊卵巢综合征发病机制的文献很少。为了阐明它们共同的发病机制,同时为药物调节它们提供潜在靶点,本研究采用生物信息学方法进行探索,以期为未来疾病关系的研究提供新的方向。

方法

通过 Genecards、在线 Mendelian 遗传在线人和治疗靶点数据库筛选骨质疏松症和多囊卵巢综合征的靶点,取两者映射的交集,上传至 STRING 数据库构建蛋白质-蛋白质相互作用网络;通过度值筛选核心靶点,并将其导入 Metascape 数据库进行基因本体论和京都基因与基因组百科全书通路分析;最后,用 Cytoscape 软件构建核心靶点和通路的可视化网络。由于本研究使用的数据是公开的,不涉及个体患者数据或隐私,因此不需要患者的伦理批准和知情同意。

结果

多囊卵巢综合征和骨质疏松症的核心靶点为胰岛素基因、胰岛素样生长因子 1、CTNNB1、丝氨酸/苏氨酸激酶 1、信号转导和转录激活因子 3、LEP 等。涉及的生物学过程包括蛋白质磷酸化调节、细胞增殖和分化、激素内分泌、生殖系统和骨骼系统。相关通路集中在 Foxo 信号通路、HTLV-I 感染、PI3K-AKT 信号通路、MAPK 信号通路和糖尿病并发症中的 AGE-RAGE 信号通路。

结论

在靶点和分子机制方面,骨质疏松症和多囊卵巢综合征之间存在密切关系。本研究采用生物信息学方法阐明了它们的靶点和机制,为药物同时调节两种疾病提供了潜在靶点,并为探索两种疾病之间的关系提供了新的方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cfc3/9276101/225a6dec9918/medi-101-e29434-g001.jpg

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