Faculty of Applied Sciences, Plant Production and Technologies, Mus Alparslan University, Muş, Turkey.
Department of Mathematics, Faculty of Education, Mus Alparslan University, Muş, Turkey.
Biometals. 2022 Oct;35(5):875-887. doi: 10.1007/s10534-022-00411-7. Epub 2022 Jun 28.
Mitochondrial iron transporter (MIT) genes are essential for mitochondrial acquisition/import of iron and vital to proper functioning of mitochondria. Unlike other organisms, research on the MITs in plants is limited. The present study provides comparative bioinformatics assays for the potato MIT gene (StMIT) as well as gene expression analyses. The phylogenetic analyses revealed monocots-dicot divergence in MIT proteins and it was also found clade specific motif diversity. In addition, docking analyses indicated that Asp172 and Gly100 residues to be identified as the closest residues binding to ferrous iron. The percentage of structure overlap of the StMIT 3D protein model with Arabidopsis, maize and rice MIT proteins was found between 80.18% and 85.71%. The transcript analyses exhibited that the expression of StMIT was triggered under drought and salinity stresses. The findings of the present study would provide valuable leads for further studies targeting specifically the MIT gene and generally the plant iron metabolism.
线粒体铁转运蛋白(MIT)基因对于线粒体摄取/导入铁以及线粒体的正常功能至关重要。与其他生物不同,植物 MIT 的研究有限。本研究提供了马铃薯 MIT 基因(StMIT)的比较生物信息学分析以及基因表达分析。系统发育分析表明 MIT 蛋白在单子叶植物和双子叶植物中发生分歧,并且还发现了特定分支的 motif 多样性。此外,对接分析表明 Asp172 和 Gly100 残基被确定为与亚铁结合的最接近残基。StMIT 3D 蛋白模型与拟南芥、玉米和水稻 MIT 蛋白的结构重叠百分比在 80.18%到 85.71%之间。转录分析表明,StMIT 的表达在干旱和盐胁迫下被触发。本研究的发现将为进一步研究 MIT 基因以及一般的植物铁代谢提供有价值的线索。