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微需氧环境中硫酸盐还原菌获取铁的基因组学洞察

Genomic insight into iron acquisition by sulfate-reducing bacteria in microaerophilic environments.

作者信息

Barton Larry L, Duarte Americo G, Staicu Lucian C

机构信息

Department of Biology, University of New Mexico, MSCO3 2020, Albuquerque, NM, 87131, USA.

Instituto de Tecnologia Química E Biológica António Xavier/Universidade NOVA de Lisboa, Av. República, Estação Agronómica Nacional, 2780-157, Oeiras, Portugal.

出版信息

Biometals. 2023 Apr;36(2):339-350. doi: 10.1007/s10534-022-00410-8. Epub 2022 Jun 29.

Abstract

Historically, sulfate-reducing bacteria (SRB) have been considered to be strict anaerobes, but reports in the past couple of decades indicate that SRB tolerate exposure to O and can even grow in aerophilic environments. With the transition from anaerobic to microaerophilic conditions, the uptake of Fe(III) from the environment by SRB would become important. In evaluating the metabolic capability for the uptake of iron, the genomes of 26 SRB, representing eight families, were examined. All SRB reviewed carry genes (feoA and feoB) for the ferrous uptake system to transport Fe(II) across the plasma membrane into the cytoplasm. In addition, all of the SRB genomes examined have putative genes for a canonical ABC transporter that may transport ferric siderophore or ferric chelated species from the environment. Gram-negative SRB have additional machinery to import ferric siderophores and ferric chelated species since they have the TonB system that can work alongside any of the outer membrane porins annotated in the genome. Included in this review is the discussion that SRB may use the putative siderophore uptake system to import metals other than iron.

摘要

从历史上看,硫酸盐还原菌(SRB)一直被认为是严格厌氧菌,但过去几十年的报告表明,SRB能够耐受氧气暴露,甚至可以在需氧环境中生长。随着从厌氧条件向微需氧条件的转变,SRB从环境中摄取Fe(III)将变得重要。在评估铁摄取的代谢能力时,对代表八个科的26种SRB的基因组进行了检查。所有被审查的SRB都携带亚铁摄取系统的基因(feoA和feoB),以将Fe(II)穿过质膜转运到细胞质中。此外,所有被检查的SRB基因组都有一个典型ABC转运蛋白的推定基因,该转运蛋白可能从环境中转运铁载体或铁螯合物种。革兰氏阴性SRB有额外的机制来导入铁载体和铁螯合物种,因为它们具有TonB系统,该系统可以与基因组中注释的任何外膜孔蛋白协同工作。本综述还讨论了SRB可能利用推定的铁载体摄取系统来导入除铁以外的其他金属。

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