• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

自适应光片荧光显微镜中照明和检测校正的定量分析。

Quantitative analysis of illumination and detection corrections in adaptive light sheet fluorescence microscopy.

作者信息

Rai Mani Ratnam, Li Chen, Greenbaum Alon

机构信息

Joint Department of Biomedical Engineering, North Carolina State University and University of North Carolina at Chapel Hill, Raleigh, NC 27695, USA.

Comparative Medicine Institute, North Carolina State University, Raleigh, NC 27695, USA.

出版信息

Biomed Opt Express. 2022 Apr 22;13(5):2960-2974. doi: 10.1364/BOE.454561. eCollection 2022 May 1.

DOI:10.1364/BOE.454561
PMID:35774332
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9203118/
Abstract

Light-sheet fluorescence microscopy (LSFM) is a high-speed, high-resolution and minimally phototoxic technique for 3D imaging of in vivo and in vitro specimens. LSFM exhibits optical sectioning and when combined with tissue clearing techniques, it facilitates imaging of centimeter scale specimens with micrometer resolution. Although LSFM is ubiquitous, it still faces two main challenges that effect image quality especially when imaging large volumes with high-resolution. First, the light-sheet illumination plane and detection lens focal plane need to be coplanar, however sample-induced aberrations can violate this requirement and degrade image quality. Second, introduction of sample-induced optical aberrations in the detection path. These challenges intensify when imaging whole organisms or structurally complex specimens like cochleae and bones that exhibit many transitions from soft to hard tissue or when imaging deep (> 2 mm). To resolve these challenges, various illumination and aberration correction methods have been developed, yet no adaptive correction in both the illumination and the detection path have been applied to improve LSFM imaging. Here, we bridge this gap, by implementing the two correction techniques on a custom built adaptive LSFM. The illumination beam angular properties are controlled by two galvanometer scanners, while a deformable mirror is positioned in the detection path to correct for aberrations. By imaging whole porcine cochlea, we compare and contrast these correction methods and their influence on the image quality. This knowledge will greatly contribute to the field of adaptive LSFM, and imaging of large volumes of tissue cleared specimens.

摘要

光片荧光显微镜(LSFM)是一种用于体内和体外标本三维成像的高速、高分辨率且光毒性极小的技术。LSFM具有光学切片功能,与组织透明化技术相结合时,有助于对厘米级标本进行微米级分辨率的成像。尽管LSFM应用广泛,但它仍面临两个影响图像质量的主要挑战,尤其是在对大体积标本进行高分辨率成像时。首先,光片照明平面和检测透镜焦平面需要共面,然而样品引起的像差会破坏这一要求并降低图像质量。其次,在检测路径中引入了样品引起的光学像差。当对整个生物体或结构复杂的标本(如耳蜗和骨骼,它们在软组织和硬组织之间有许多过渡)进行成像,或者对深度超过2毫米的标本进行成像时,这些挑战会加剧。为了解决这些挑战,人们开发了各种照明和像差校正方法,但尚未应用在照明和检测路径中都进行自适应校正的方法来改善LSFM成像。在这里,我们通过在定制的自适应LSFM上实施这两种校正技术来弥补这一差距。照明光束的角度特性由两个振镜扫描仪控制,同时在检测路径中放置一个可变形镜来校正像差。通过对整个猪耳蜗进行成像,我们比较并对比了这些校正方法及其对图像质量的影响。这些知识将极大地推动自适应LSFM领域以及对大量组织透明标本的成像研究。

相似文献

1
Quantitative analysis of illumination and detection corrections in adaptive light sheet fluorescence microscopy.自适应光片荧光显微镜中照明和检测校正的定量分析。
Biomed Opt Express. 2022 Apr 22;13(5):2960-2974. doi: 10.1364/BOE.454561. eCollection 2022 May 1.
2
Illumination angle correction during image acquisition in light-sheet fluorescence microscopy using deep learning.在光片荧光显微镜的图像采集过程中使用深度学习进行照明角度校正。
Biomed Opt Express. 2022 Jan 21;13(2):888-901. doi: 10.1364/BOE.447392. eCollection 2022 Feb 1.
3
Deep learning-based adaptive optics for light sheet fluorescence microscopy.基于深度学习的自适应光学技术用于光片荧光显微镜。
Biomed Opt Express. 2023 May 25;14(6):2905-2919. doi: 10.1364/BOE.488995. eCollection 2023 Jun 1.
4
Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy.基于深度学习的自动对焦方法提高了光片荧光显微镜的图像质量。
Biomed Opt Express. 2021 Jul 22;12(8):5214-5226. doi: 10.1364/BOE.427099. eCollection 2021 Aug 1.
5
Light Sheet Fluorescence Microscopy (LSFM).光片荧光显微镜(LSFM)。
Curr Protoc Cytom. 2015 Jan 5;71:12.37.1-12.37.15. doi: 10.1002/0471142956.cy1237s71.
6
Adaptive optics in an oblique plane microscope.斜平面显微镜中的自适应光学。
Biomed Opt Express. 2024 Jul 9;15(8):4498-4512. doi: 10.1364/BOE.524013. eCollection 2024 Aug 1.
7
Adaptive Optics in an Oblique Plane Microscope.斜平面显微镜中的自适应光学
bioRxiv. 2024 Mar 22:2024.03.21.586191. doi: 10.1101/2024.03.21.586191.
8
csiLSFM combines light-sheet fluorescence microscopy and coherent structured illumination for a lateral resolution below 100 nm.相干扫描光片荧光显微镜(csiLSFM)结合了光片荧光显微镜和相干结构照明显微技术,实现了低于100纳米的横向分辨率。
Proc Natl Acad Sci U S A. 2017 May 9;114(19):4869-4874. doi: 10.1073/pnas.1609278114. Epub 2017 Apr 24.
9
Enhancing Light-Sheet Fluorescence Microscopy Illumination Beams through Deep Design Optimization.通过深度设计优化增强光片荧光显微镜照明光束
bioRxiv. 2023 Dec 1:2023.11.29.569329. doi: 10.1101/2023.11.29.569329.
10
Light sheet microscopy and live imaging of plants.植物的光片显微镜技术与活体成像
J Microsc. 2016 Aug;263(2):158-64. doi: 10.1111/jmi.12393. Epub 2016 Mar 28.

引用本文的文献

1
Roadmap on computational methods in optical imaging and holography [invited].光学成像与全息术中计算方法路线图[特邀报告]
Appl Phys B. 2024;130(9):166. doi: 10.1007/s00340-024-08280-3. Epub 2024 Aug 29.
2
Intelligent Beam Optimization for Light-Sheet Fluorescence Microscopy through Deep Learning.通过深度学习实现光片荧光显微镜的智能光束优化
Intell Comput. 2024;3. doi: 10.34133/icomputing.0095. Epub 2024 Jul 4.
3
Enhancing Light-Sheet Fluorescence Microscopy Illumination Beams through Deep Design Optimization.通过深度设计优化增强光片荧光显微镜照明光束
bioRxiv. 2023 Dec 1:2023.11.29.569329. doi: 10.1101/2023.11.29.569329.
4
Harnessing the power of optical microscopy for visualization and analysis of histopathological images.利用光学显微镜的力量进行组织病理学图像的可视化和分析。
Biomed Opt Express. 2023 Sep 26;14(10):5451-5465. doi: 10.1364/BOE.501893. eCollection 2023 Oct 1.
5
Deep learning-based adaptive optics for light sheet fluorescence microscopy.基于深度学习的自适应光学技术用于光片荧光显微镜。
Biomed Opt Express. 2023 May 25;14(6):2905-2919. doi: 10.1364/BOE.488995. eCollection 2023 Jun 1.
6
Tissue clearing and three-dimensional imaging of the whole cochlea and vestibular system from multiple large-animal models.来自多个大型动物模型的整个耳蜗和前庭系统的组织透明化及三维成像
STAR Protoc. 2023 Apr 13;4(2):102220. doi: 10.1016/j.xpro.2023.102220.
7
Active image optimization for lattice light sheet microscopy in thick samples.厚样本中晶格光片显微镜的主动图像优化
Biomed Opt Express. 2022 Nov 7;13(12):6211-6228. doi: 10.1364/BOE.471757. eCollection 2022 Dec 1.
8
Ontogeny of cellular organization and LGR5 expression in porcine cochlea revealed using tissue clearing and 3D imaging.利用组织透明化和三维成像技术揭示猪耳蜗细胞组织的个体发生及LGR5表达情况。
iScience. 2022 Jun 30;25(8):104695. doi: 10.1016/j.isci.2022.104695. eCollection 2022 Aug 19.

本文引用的文献

1
Illumination angle correction during image acquisition in light-sheet fluorescence microscopy using deep learning.在光片荧光显微镜的图像采集过程中使用深度学习进行照明角度校正。
Biomed Opt Express. 2022 Jan 21;13(2):888-901. doi: 10.1364/BOE.447392. eCollection 2022 Feb 1.
2
Adaptive optics for high-resolution imaging.用于高分辨率成像的自适应光学技术。
Nat Rev Methods Primers. 2021;1. doi: 10.1038/s43586-021-00066-7. Epub 2021 Oct 14.
3
Deep learning-based autofocus method enhances image quality in light-sheet fluorescence microscopy.基于深度学习的自动对焦方法提高了光片荧光显微镜的图像质量。
Biomed Opt Express. 2021 Jul 22;12(8):5214-5226. doi: 10.1364/BOE.427099. eCollection 2021 Aug 1.
4
Tutorial: practical considerations for tissue clearing and imaging.教程:组织透明化和成像的实际考量
Nat Protoc. 2021 Jun;16(6):2732-2748. doi: 10.1038/s41596-021-00502-8. Epub 2021 May 21.
5
Three-dimensional imaging of intact porcine cochlea using tissue clearing and custom-built light-sheet microscopy.使用组织透明化和定制光片显微镜对完整猪耳蜗进行三维成像。
Biomed Opt Express. 2020 Oct 8;11(11):6181-6196. doi: 10.1364/BOE.402991. eCollection 2020 Nov 1.
6
Tutorial: guidance for quantitative confocal microscopy.教程:定量共聚焦显微镜使用指南。
Nat Protoc. 2020 May;15(5):1585-1611. doi: 10.1038/s41596-020-0313-9. Epub 2020 Mar 31.
7
Tissue clearing and its applications in neuroscience.组织透明化及其在神经科学中的应用。
Nat Rev Neurosci. 2020 Feb;21(2):61-79. doi: 10.1038/s41583-019-0250-1.
8
Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution.基于各向同性、亚细胞分辨率的组织透明化光片显微镜技术。
Nat Methods. 2019 Nov;16(11):1109-1113. doi: 10.1038/s41592-019-0615-4. Epub 2019 Oct 31.
9
Adaptive optics light-sheet microscopy based on direct wavefront sensing without any guide star.基于无任何导星的直接波前传感的自适应光学光片显微镜。
Opt Lett. 2019 May 15;44(10):2514-2517. doi: 10.1364/OL.44.002514.
10
A practical guide to adaptive light-sheet microscopy.自适应共聚焦显微镜实用指南。
Nat Protoc. 2018 Nov;13(11):2462-2500. doi: 10.1038/s41596-018-0043-4.