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意大利蝗卵对低温驯化响应的转录组分析。

Transcriptome analysis of the response to low temperature acclimation in Calliptamus italicus eggs.

机构信息

International Center for the Collaborative Management of Cross-border Pest in Central Asia, Xinjiang Key Laboratory of Special Species Conservation and Regulatory Biology, Xinjiang Normal University, Urumqi, 830054, China.

Al-Farabi Kazakh National University, Almaty, Kazakhstan, 050038.

出版信息

BMC Genomics. 2022 Jul 1;23(1):482. doi: 10.1186/s12864-022-08705-3.

Abstract

BACKGROUND

Calliptamus italicus is a dominant species in the desert and semi-desert grassland. It is widely distributed throughout many regions such as Asia, Europe, North Africa and the Mediterranean, and has enormous destructive potential for agriculture and animal husbandry. The C. italicus overwintering as eggs in the soil through diapause, and the cold tolerance of locust eggs is the key to their ability to survive the winter smoothly to maintain the population.

RESULTS

Transcriptome analysis of C. italicus eggs was carried out in this paper in constant low temperature acclimation, natural low temperature acclimation and room temperature. The differentially expressed genes related to cold tolerance were screened out, the differences in expression patterns under different low temperature acclimation were analyzed, and the genes in the significantly up-regulated pathways may play an important role in cold tolerance. The results show that different domestication modes can induce C. italicus eggs to express a large number of genes to alleviate low temperature damage, but C. italicus eggs are more sensitive to changes in temperature. Compared with the control, there are 8689 DEGs at constant low temperature and 14,994 DEGs at natural low temperature. KEGG analysis showed that DEGs were mainly enriched in pathways related to metabolism and biological systems under constant low temperature, and were mainly enriched in pathways related to biological systems and environmental information processing under natural low temperature. In addition, RNAi technology was used to further verify the regulation of genes in the significantly enriched up-regulated pathways on C. italicus eggs, and it was confirmed that the hatching rate of C. italicus eggs at low temperature was significantly reduced after interference.

CONCLUSIONS

Transcriptome analysis of C. italicus eggs treated at different temperatures provided a theoretical basis for further understanding the adaptation mechanism of C. italicus eggs to low temperature. In addition, four potential RNAi target genes were verified in the eggs of C. italicus for the first time, providing new ideas for effective control of this species.

摘要

背景

中华剑角蝗是荒漠和半荒漠草原的优势种,广泛分布于亚洲、欧洲、北非和地中海等地区,对农牧业具有巨大的破坏性。中华剑角蝗以卵滞育的方式在土壤中越冬,其卵的耐寒性是其顺利越冬并维持种群生存的关键。

结果

本文对中华剑角蝗卵进行了恒低温驯化、自然低温驯化和室温条件下的转录组分析,筛选出与耐寒性相关的差异表达基因,分析不同低温驯化条件下表达模式的差异,以及在显著上调途径中的基因可能在耐寒性中发挥重要作用。结果表明,不同的驯化方式可以诱导中华剑角蝗卵表达大量基因来缓解低温损伤,但中华剑角蝗卵对温度变化更为敏感。与对照相比,恒低温下有 8689 个 DEGs,自然低温下有 14994 个 DEGs。KEGG 分析表明,DEGs 主要富集在恒低温下与代谢和生物系统相关的途径中,在自然低温下主要富集在与生物系统和环境信息处理相关的途径中。此外,还利用 RNAi 技术进一步验证了显著富集上调途径中的基因对中华剑角蝗卵的调控作用,证实了低温处理后中华剑角蝗卵的孵化率明显降低。

结论

对不同温度处理的中华剑角蝗卵进行转录组分析,为进一步了解中华剑角蝗卵对低温的适应机制提供了理论依据。此外,首次在中华剑角蝗卵中验证了四个潜在的 RNAi 靶基因,为该物种的有效防控提供了新的思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7486/9248191/0c96e46802f3/12864_2022_8705_Fig1_HTML.jpg

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