Mariasina Sofia S, Chang Chi-Fon, Navalayeu Tsimafei L, Chugunova Anastasia A, Efimov Sergey V, Zgoda Viktor G, Ivlev Vasily A, Dontsova Olga A, Sergiev Petr V, Polshakov Vladimir I
Faculty of Fundamental Medicine, M.V. Lomonosov Moscow State University, Moscow, Russia.
Institute of Functional Genomics, M.V. Lomonosov Moscow State University, Moscow, Russia.
Front Mol Biosci. 2022 Jun 15;9:865743. doi: 10.3389/fmolb.2022.865743. eCollection 2022.
Williams-Beuren syndrome (WBS) is a genetic disorder associated with the hemizygous deletion of several genes in chromosome 7, encoding 26 proteins. Malfunction of these proteins induce multisystemic failure in an organism. While biological functions of most proteins are more or less established, the one of methyltransferase WBSCR27 remains elusive. To find the substrate of methylation catalyzed by WBSCR27 we constructed mouse cell lines with a gene knockout and studied the obtained cells using several molecular biology and mass spectrometry techniques. We attempted to pinpoint the methylation target among the RNAs and proteins, but in all cases neither a direct substrate has been identified nor the protein partners have been detected. To reveal the nature of the putative methylation substrate we determined the solution structure and studied the conformational dynamic properties of WBSCR27 in apo state and in complex with S-adenosyl-L-homocysteine (SAH). The protein core was found to form a canonical Rossman fold common for Class I methyltransferases. N-terminus of the protein and the β6-β7 loop were disordered in apo-form, but binding of SAH induced the transition of these fragments to a well-formed substrate binding site. Analyzing the structure of this binding site allows us to suggest potential substrates of WBSCR27 methylation to be probed in further research.
威廉姆斯-贝伦综合征(WBS)是一种与7号染色体上多个基因的半合子缺失相关的遗传疾病,这些基因编码26种蛋白质。这些蛋白质的功能异常会导致生物体出现多系统功能衰竭。虽然大多数蛋白质的生物学功能或多或少已被确定,但甲基转移酶WBSCR27的功能仍然不清楚。为了找到WBSCR27催化的甲基化底物,我们构建了基因敲除的小鼠细胞系,并使用多种分子生物学和质谱技术研究了所获得的细胞。我们试图在RNA和蛋白质中确定甲基化靶点,但在所有情况下,既未鉴定出直接底物,也未检测到蛋白质伴侣。为了揭示假定甲基化底物的性质,我们确定了WBSCR27在无配体状态以及与S-腺苷-L-高半胱氨酸(SAH)形成复合物时的溶液结构,并研究了其构象动力学特性。发现该蛋白质核心形成了I类甲基转移酶常见的典型罗斯曼折叠。该蛋白质的N端和β6-β7环在无配体形式下无序,但SAH的结合诱导这些片段转变为结构良好的底物结合位点。分析该结合位点的结构使我们能够提出WBSCR27甲基化的潜在底物,以便在进一步研究中进行探索。