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一种工程化的 PET 解聚酶的 NMR 研究。

An NMR look at an engineered PET depolymerase.

机构信息

Toulouse Biotechnology Institute (TBI), Université de Toulouse, CNRS, INRAE, INSA, Toulouse 31077, France.

Carbios, Biopôle Clermont Limagne, Saint-Beauzire, France.

出版信息

Biophys J. 2022 Aug 2;121(15):2882-2894. doi: 10.1016/j.bpj.2022.07.002. Epub 2022 Jul 6.

Abstract

Plastic environmental pollution is a major issue that our generation must face to protect our planet. Plastic recycling has the potential not only to reduce the pollution but also to limit the need for fossil-fuel-based production of new plastics. Enzymes capable of breaking down plastic could thereby support such a circular economy. Polyethylene terephthalate (PET) degrading enzymes have recently attracted considerable interest and have been subjected to intensive enzyme engineering to improve their characteristics. A quadruple mutant of Leaf-branch Compost Cutinase (LCC) was identified as a most efficient and promising enzyme. Here, we use NMR to follow the initial LCC enzyme through its different mutations that lead to its improved performance. We experimentally define the two calcium-binding sites and show their importance on the all-or-nothing thermal unfolding process, which occurs at a temperature of 72°C close to the PET glass transition temperature. Using various NMR probes such as backbone amide, methyl group, and histidine side-chain resonances, we probe the interaction of the enzymes with mono-(2-hydroxyethyl)terephthalic acid. The latter experiments are interpreted in terms of accessibility of the active site to the polymer chain.

摘要

塑料环境污染是我们这一代人必须面对的一个主要问题,以保护我们的星球。塑料回收不仅有可能减少污染,还有可能限制对基于化石燃料的新型塑料的需求。能够分解塑料的酶因此可以支持这种循环经济。聚对苯二甲酸乙二醇酯(PET)降解酶最近引起了相当大的兴趣,并经过了密集的酶工程改造,以改善其特性。叶枝堆肥角质酶(LCC)的四重突变体被鉴定为最有效和最有前途的酶。在这里,我们使用 NMR 来跟踪初始 LCC 酶通过其不同的突变,从而提高其性能。我们通过实验定义了两个钙结合位点,并显示了它们在全有或全无的热展开过程中的重要性,该过程发生在接近 PET 玻璃化转变温度 72°C 的温度下。我们使用各种 NMR 探针,如骨架酰胺、甲基和组氨酸侧链共振,来探测酶与单-(2-羟乙基)对苯二甲酸的相互作用。后一个实验是根据活性位点对聚合物链的可及性来解释的。

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