Divisions of Clinical Pharmacology and Research in Patient Services, Cincinnati Children's Hospital Medical Center, Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio, USA.
Department of Biomedical Data Science, Stanford University, Stanford, California, USA.
Clin Pharmacol Ther. 2023 Apr;113(4):782-793. doi: 10.1002/cpt.2705. Epub 2022 Jul 27.
The Pharmacogene Variation Consortium (PharmVar) is now providing star (*) allele nomenclature for the highly polymorphic human SLCO1B1 gene encoding the organic anion transporting polypeptide 1B1 (OATP1B1) drug transporter. Genetic variation within the SLCO1B1 gene locus impacts drug transport, which can lead to altered pharmacokinetic profiles of several commonly prescribed drugs. Variable OATP1B1 function is of particular importance regarding hepatic uptake of statins and the risk of statin-associated musculoskeletal symptoms. To introduce this important drug transporter gene into the PharmVar database and serve as a unified reference of haplotype variation moving forward, an international group of gene experts has performed an extensive review of all published SLCO1B1 star alleles. Previously published star alleles were self-assigned by authors and only loosely followed the star nomenclature system that was first developed for cytochrome P450 genes. This nomenclature system has been standardized by PharmVar and is now applied to other important pharmacogenes such as SLCO1B1. In addition, data from the 1000 Genomes Project and investigator-submitted data were utilized to confirm existing haplotypes, fill knowledge gaps, and/or define novel star alleles. The PharmVar-developed SLCO1B1 nomenclature has been incorporated by the Clinical Pharmacogenetics Implementation Consortium (CPIC) 2022 guideline on statin-associated musculoskeletal symptoms.
药物基因变异联合会 (PharmVar) 现提供高度多态性人类 SLCO1B1 基因的星号(*)等位基因命名法,该基因编码有机阴离子转运多肽 1B1 (OATP1B1) 药物转运蛋白。SLCO1B1 基因座内的遗传变异会影响药物转运,从而导致几种常用处方药的药代动力学特征发生改变。OATP1B1 功能的变异性对于他汀类药物的肝摄取和他汀类药物相关肌肉骨骼症状的风险尤为重要。为了将这个重要的药物转运基因引入 PharmVar 数据库,并作为未来单倍型变异的统一参考,一组国际基因专家对所有已发表的 SLCO1B1 星号等位基因进行了广泛的回顾。先前发表的星号等位基因是由作者自行分配的,并且仅松散地遵循最初为细胞色素 P450 基因开发的星号命名法系统。该命名系统已被 PharmVar 标准化,现在已应用于其他重要的药物基因,如 SLCO1B1。此外,还利用了 1000 基因组计划和调查员提交的数据来确认现有单倍型、填补知识空白和/或定义新的星号等位基因。PharmVar 开发的 SLCO1B1 命名法已被临床药物遗传学实施联盟 (CPIC) 2022 年他汀类药物相关肌肉骨骼症状指南采用。