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比较转录组和蛋白质组分析为红麻叶片蛋白质合成机制提供新见解。

Comparative Transcriptome and Proteome Analysis Provides New Insights Into the Mechanism of Protein Synthesis in Kenaf ( L.) Leaves.

作者信息

Zhang Chao, Deng Yong, Zhang Gaoyang, Li Jianjun, Xiao Aiping, Zhao Lining, Chen Anguo, Tang Huijuan, Chang Li, Pan Gen, Wu Yingbao, Zhang Jiangjiang, Zhang Cuiping, Birhanie Ziggiju Mesenbet, Li Hui, Wu Juan, Yang Dawei, Li Defang, Huang Siqi

机构信息

Institute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, China.

School of Life Sciences, Shangrao Normal University, Shangrao, China.

出版信息

Front Plant Sci. 2022 Jun 21;13:879874. doi: 10.3389/fpls.2022.879874. eCollection 2022.

Abstract

Given the rising domestic demand and increasing global prices of corn and soybean, China is looking for alternatives for these imports to produce animal fodder. Kenaf ( L.) has great potential as a new forage source, due to abundant proteins, phenols and flavonoids in its leaves. However, few studies have evaluated the mechanism of protein synthesis in kenaf leaves. In the current work, compared with kenaf material "L332," the percentage of crude protein content in leaves of material "Q303" increased by 6.13%; combined with transcriptome and proteome data, the kenaf samples were systematically studied to obtain mRNA-protein correlation. Then, the genes/proteins related to protein synthesis in the kenaf leaves were obtained. Moreover, this work detected mRNA expression of 20 differentially expressed genes (DEGs). Meanwhile, 20 differentially expressed proteins (DEPs) related to protein synthesis were performed parallel reaction monitoring. Fructose-1,6-bisphosphatase (), nitrite reductase (), prolyl tRNA synthase () and glycine dehydrogenase () presented increased mRNA and protein levels within kenaf leaves with high protein content. Based on the obtained findings, , , , and genes may exert a vital function in the protein synthesis of kenaf leaves. The results provide a new idea for further studying the potential genes affecting the quality trait of protein content in kenaf leaves and provide gene resources and a theoretical foundation for further cultivating high protein kenaf varieties.

摘要

鉴于国内对玉米和大豆的需求不断上升以及全球价格上涨,中国正在寻找这些进口产品的替代品以生产动物饲料。红麻(L.)作为一种新的饲料来源具有巨大潜力,因为其叶片中含有丰富的蛋白质、酚类和黄酮类化合物。然而,很少有研究评估红麻叶片中蛋白质合成的机制。在当前的工作中,与红麻材料“L332”相比,材料“Q303”叶片中的粗蛋白含量百分比增加了6.13%;结合转录组和蛋白质组数据,对红麻样本进行了系统研究以获得mRNA-蛋白质相关性。然后,获得了与红麻叶片中蛋白质合成相关的基因/蛋白质。此外,这项工作检测了20个差异表达基因(DEGs)的mRNA表达。同时,对20个与蛋白质合成相关的差异表达蛋白(DEPs)进行了平行反应监测。果糖-1,6-二磷酸酶()、亚硝酸还原酶()、脯氨酰tRNA合成酶()和甘氨酸脱氢酶()在高蛋白含量的红麻叶片中的mRNA和蛋白质水平均有所增加。基于获得的研究结果,、、、和基因可能在红麻叶片的蛋白质合成中发挥重要作用。这些结果为进一步研究影响红麻叶片蛋白质含量品质性状的潜在基因提供了新思路,并为进一步培育高蛋白红麻品种提供了基因资源和理论基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/584f/9255553/8930654872f7/fpls-13-879874-g001.jpg

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