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基于生物信息学分析的肺癌 Expression 的预后意义。

Prognostic Significance of Expression in Lung Cancer Based on Bioinformatics Analysis.

机构信息

Department of Pharmaceutical Biochemistry and Molecular Diagnostics, Medical University of Lodz, Muszyńskiego 1, 90-151 Lodz, Poland.

出版信息

Int J Mol Sci. 2022 Jun 22;23(13):6933. doi: 10.3390/ijms23136933.

Abstract

High-mobility group protein 1 (HMGA1) participates in the processes of DNA transcription, replication, recombination, and repair. The gene is expressed abundantly during embryogenesis and is reactivated during carcinogenesis. gene expression has been associated with a high degree of malignancy, metastatic tendency, and poor survival in breast, colon, ovary, and pancreatic cancers. However, its prognostic significance in lung cancer remains unclear. Using publicly available data, was shown to be overexpressed in both small and non-small lung tumors, with higher expression compared to both the adjacent non-malignant lung tissues and non-tumor lung tissues of healthy individuals. Elevated expression could result from lowered methylation and was connected with some clinicopathological features like sex, age, and stage of the disease. The high expression level was connected with shorter overall and first progression survival time among lung adenocarcinoma patients, but not lung squamous cell carcinoma patients. HMGA1 could interact with proteins involved in cellular senescence and cell cycle control (TP53, RB1, RPS6KB1, and CDK1), transcription regulation (EP400 and HMGA2), chromatin assembly and remodeling (LMNB1), and cholesterol and isoprene biosynthesis (HMGCR and INSIG1). Taken together, overexpression could be an essential element of lung carcinogenesis and a prognostic feature in lung cancer.

摘要

高迁移率族蛋白 1(HMGA1)参与 DNA 转录、复制、重组和修复过程。该基因在胚胎发生过程中大量表达,并在致癌过程中重新激活。基因表达与高度恶性、转移倾向和乳腺癌、结肠癌、卵巢癌和胰腺癌的不良生存相关。然而,其在肺癌中的预后意义尚不清楚。使用公开可用的数据表明,在小细胞和非小细胞肺癌肿瘤中均过度表达,与相邻的非恶性肺组织和健康个体的非肿瘤肺组织相比,表达水平更高。升高的表达可能是由于降低了甲基化所致,与性别、年龄和疾病分期等一些临床病理特征有关。高表达水平与肺腺癌患者的总生存期和首次进展生存期缩短有关,但与肺鳞癌患者无关。HMGA1 可以与参与细胞衰老和细胞周期控制的蛋白质(TP53、RB1、RPS6KB1 和 CDK1)、转录调节(EP400 和 HMGA2)、染色质组装和重塑(LMNB1)以及胆固醇和异戊二烯生物合成(HMGCR 和 INSIG1)相互作用。综上所述,HMGA1 过表达可能是肺癌发生的重要因素,也是肺癌的预后特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d561/9266824/22641bc809f6/ijms-23-06933-g001.jpg

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