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碳-氮-硫相关的微生物分类群和基因维持了煤中微生物群落的稳定性。

Carbon-Nitrogen-Sulfur-Related Microbial Taxa and Genes Maintained the Stability of Microbial Communities in Coals.

作者信息

Li Yang, Liu Bingjun, Chen Jian, Yue Xuelian

机构信息

State Key Laboratory of Mining Response and Disaster Prevention and Control in Deep Coal Mines, Anhui University of Science & Technology, Huainan, Anhui 232001, China.

Institute of Energy, Hefei Comprehensive National Science Center, Hefei, Anhui 230031, China.

出版信息

ACS Omega. 2022 Jun 22;7(26):22671-22681. doi: 10.1021/acsomega.2c02126. eCollection 2022 Jul 5.

Abstract

Coal microbes are the predominant form of life in the subsurface ecosystem, which play a vital role in biogeochemical cycles. However, the systematic information about carbon-nitrogen-sulfur (C-N-S)-related microbial communities in coal seams is limited. In this study, 16S rRNA gene data from a total of 93 microbial communities in coals were collected for meta-analysis. The results showed that 718 functional genera were related to the C-N-S cycle, wherein N fixation, denitrification, and C degradation groups dominated in relative abundance, Chao1 richness, Shannon diversity, and niche width. Genus having the most C-N-S-related functions showed the highest relative abundance, and genus with a higher abundance participated in C degradation, CH oxidation, N fixation, ammoxidation, and denitrification. Such was a core genus in the co-occurrence network of microbial prokaryotes and showed higher levels in weight degree, betweenness centrality, and eigenvector centrality. In addition, most of the methanogens could fix N and dominated in the N fixation groups. Among them, genera and showed higher levels in the betweenness centrality index. In addition, the genus was linked to the methanogenesis co-occurrence network module. In parallel, the S reduction gene was present in the highest total relative abundance of genes, followed by the C degradation and the denitrification genes, and S genes (especially genes) were the main genes linked to the co-occurrence network of the C-N-S-related genes. In summary, this study strengthened our knowledge regarding the C-N-S-related coal microbial communities, which is of great significance in understanding the microbial ecology and geochemical cycle of coals.

摘要

煤微生物是地下生态系统中主要的生命形式,在生物地球化学循环中发挥着至关重要的作用。然而,关于煤层中与碳 - 氮 - 硫(C - N - S)相关的微生物群落的系统信息有限。在本研究中,收集了来自93个煤中微生物群落的16S rRNA基因数据进行荟萃分析。结果表明,有718个功能属与C - N - S循环相关,其中固氮、反硝化和碳降解组在相对丰度、Chao1丰富度、香农多样性和生态位宽度方面占主导地位。具有最多C - N - S相关功能的属显示出最高的相对丰度,丰度较高的属参与碳降解、CH氧化、固氮、氨氧化和反硝化。这样的属是微生物原核生物共现网络中的核心属,在权重度、介数中心性和特征向量中心性方面表现较高。此外,大多数产甲烷菌能够固氮并在固氮组中占主导地位。其中,属 和 在介数中心性指数方面表现较高。此外,属 与产甲烷作用共现网络模块相关联。同时,硫还原基因在基因总相对丰度中最高,其次是碳降解和反硝化基因,并且硫基因(特别是 基因)是与C - N - S相关基因共现网络相关的主要基因。总之,本研究加强了我们对与C - N - S相关的煤微生物群落的认识,这对于理解煤的微生物生态学和地球化学循环具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0772/9260939/3fb4d4f22578/ao2c02126_0002.jpg

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