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全基因组关联研究以及对参与“我的生活,我们的未来”血友病A和抑制物研究库的患者进行基因分析。

Genome-Wide Association Study and Gene-Based Analysis of Participants With Hemophilia A and Inhibitors in the My Life, Our Future Research Repository.

作者信息

Lessard Samuel, He Chunla, Rajpal Deepak K, Klinger Katherine, Loh Christine, Harris Tim, Dumont Jennifer

机构信息

Sanofi S.A., Framingham, MA, United States.

American Thrombosis and Hemostasis Network, Rochester, NY, United States.

出版信息

Front Med (Lausanne). 2022 Jun 23;9:903838. doi: 10.3389/fmed.2022.903838. eCollection 2022.

Abstract

INTRODUCTION

Up to 30% of individuals with hemophilia A develop inhibitors to replacement factor VIII (FVIII), rendering the treatment ineffective. The underlying mechanism of inhibitor development remains poorly understood. The My Life, Our Future Research Repository (MLOF RR) has gathered and mutational information, phenotypic data, and biological material from over 11,000 participants with hemophilia A (HA) and B as well as carriers enrolled across US hemophilia treatment centers, including over 5,000 whole-genome sequences. Identifying genes associated with inhibitors may contribute to our understanding of why certain patients develop those neutralizing antibodies.

AIM AND METHODS

Here, we performed a genome-wide association study and gene-based analyses to identify genes associated with inhibitors in participants with HA from the MLOF RR.

RESULTS

We identify a genome-wide significant association within the human leukocyte antigen (HLA) locus in participants with HA with intronic inversions. HLA typing revealed independent associations with the HLA alleles major histocompatibility complex, class II, DR beta 1 (HLA DRB115:01) and major histocompatibility complex, class II, DQ beta 1 (DQB103:03). Variant aggregation tests further identified low-frequency variants within (glutamate receptor, ionotropic, delta 2 [] interacting protein 1) significantly associated with inhibitors.

CONCLUSION

Overall, our study confirms the association of DRB115:01 with FVIII inhibitors and identifies a novel association of DQB103:03 in individuals with HA carrying intronic inversions of . In addition, our results implicate , encoding -interacting protein, with the development of inhibitors, and suggest an unrecognized role of this gene in autoimmunity.

摘要

引言

高达30%的甲型血友病患者会产生针对替代凝血因子VIII(FVIII)的抑制剂,导致治疗无效。抑制剂产生的潜在机制仍知之甚少。“我的生活,我们的未来研究库”(MLOF RR)收集了来自美国各地血友病治疗中心的11000多名甲型血友病(HA)和乙型血友病患者以及携带者的基因和突变信息、表型数据及生物材料,其中包括5000多个全基因组序列。识别与抑制剂相关的基因可能有助于我们理解为何某些患者会产生这些中和抗体。

目的和方法

在此,我们进行了一项全基因组关联研究和基于基因的分析,以识别MLOF RR中HA患者体内与抑制剂相关的基因。

结果

我们在HA患者的人类白细胞抗原(HLA)基因座内发现了一个全基因组显著关联,该基因座存在内含子倒位。HLA分型显示与HLA等位基因主要组织相容性复合体II类DRβ1(HLA DRB115:01)和主要组织相容性复合体II类DQβ1(DQB103:03)存在独立关联。变异聚集测试进一步确定了(离子型谷氨酸受体δ2 []相互作用蛋白1)内的低频变异与抑制剂显著相关。

结论

总体而言,我们的研究证实了DRB115:01与FVIII抑制剂之间的关联,并在携带内含子倒位的HA个体中识别出DQB103:03的新关联。此外,我们的结果表明,编码 -相互作用蛋白的 与抑制剂的产生有关,并提示该基因在自身免疫中存在未被认识的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e34/9260508/1ed721b692ad/fmed-09-903838-g001.jpg

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