De Duve Institute and WELBIO, UCLouvain, Avenue Hippocrate 75, 1200, Brussels, Belgium.
Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, 43124, Parma, Italy.
Cell Mol Life Sci. 2022 Jul 14;79(8):421. doi: 10.1007/s00018-022-04439-3.
Transaminases play key roles in central metabolism, transferring the amino group from a donor substrate to an acceptor. These enzymes can often act, with low efficiency, on compounds different from the preferred substrates. To understand what might have shaped the substrate specificity of this class of enzymes, we examined the reactivity of six human cytosolic transaminases towards amino acids whose main degradative pathways do not include any transamination. We also tested whether sugars and sugar phosphates could serve as alternative amino group acceptors for these cytosolic enzymes. Each of the six aminotransferases reacted appreciably with at least three of the alternative amino acid substrates in vitro, albeit at usually feeble rates. Reactions with L-Thr, L-Arg, L-Lys and L-Asn were consistently very slow-a bias explained in part by the structural differences between these amino acids and the preferred substrates of the transaminases. On the other hand, L-His and L-Trp reacted more efficiently, particularly with GTK (glutamine transaminase K; also known as KYAT1). This points towards a role of GTK in the salvage of L-Trp (in cooperation with ω-amidase and possibly with the cytosolic malate dehydrogenase, MDH1, which efficiently reduced the product of L-Trp transamination). Finally, the transaminases were extremely ineffective at utilizing sugars and sugar derivatives, with the exception of the glycolytic intermediate dihydroxyacetone phosphate, which was slowly but appreciably transaminated by some of the enzymes to yield serinol phosphate. Evidence for the formation of this compound in a human cell line was also obtained. We discuss the biological and evolutionary implications of our results.
转氨酶在中心代谢中起着关键作用,将氨基从供体底物转移到受体上。这些酶通常可以低效地作用于与其首选底物不同的化合物。为了了解是什么塑造了这一类酶的底物特异性,我们研究了六种人类细胞质转氨酶对其主要降解途径不包括任何转氨基作用的氨基酸的反应性。我们还测试了糖和糖磷酸是否可以作为这些细胞质酶的替代氨基受体。这六种氨基转移酶中的每一种在体外都与至少三种替代氨基酸底物有明显反应,尽管通常反应速率很弱。与 L-Thr、L-Arg、L-Lys 和 L-Asn 的反应一直非常缓慢——这种偏向部分可以用这些氨基酸与氨基转移酶的首选底物之间的结构差异来解释。另一方面,L-His 和 L-Trp 反应效率更高,特别是与 GTK(谷氨酰胺转氨酶 K;也称为 KYAT1)。这表明 GTK 在 L-Trp 的挽救中起作用(与 ω-酰胺酶合作,可能与细胞质苹果酸脱氢酶 MDH1 合作,后者有效地还原 L-Trp 转氨基的产物)。最后,除了糖酵解中间产物二羟丙酮磷酸外,转氨酶对糖和糖衍生物的利用效率极低,后者被一些酶缓慢但明显地转氨基生成丝氨酸磷酸。在人细胞系中也获得了该化合物形成的证据。我们讨论了我们结果的生物学和进化意义。