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巴德-比埃尔综合征中的等位基因过载及其临床修饰效应。

Allelic overload and its clinical modifier effect in Bardet-Biedl syndrome.

作者信息

Perea-Romero Irene, Solarat Carlos, Blanco-Kelly Fiona, Sanchez-Navarro Iker, Bea-Mascato Brais, Martin-Salazar Eduardo, Lorda-Sanchez Isabel, Swafiri Saoud Tahsin, Avila-Fernandez Almudena, Martin-Merida Inmaculada, Trujillo-Tiebas Maria Jose, Carreño Ester, Jimenez-Rolando Belen, Garcia-Sandoval Blanca, Minguez Pablo, Corton Marta, Valverde Diana, Ayuso Carmen

机构信息

Department of Genetics, Health Research Institute-Fundación Jiménez Díaz University Hospital, Universidad Autónoma de Madrid (IIS-FJD, UAM), Madrid, Spain.

Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid, Spain.

出版信息

NPJ Genom Med. 2022 Jul 14;7(1):41. doi: 10.1038/s41525-022-00311-2.

Abstract

Bardet-Biedl syndrome (BBS) is an autosomal recessive ciliopathy characterized by extensive inter- and intra-familial variability, in which oligogenic interactions have been also reported. Our main goal is to elucidate the role of mutational load in the clinical variability of BBS. A cohort of 99 patients from 77 different families with biallelic pathogenic variants in a BBS-associated gene was retrospectively recruited. Human Phenotype Ontology terms were used in the annotation of clinical symptoms. The mutational load in 39 BBS-related genes was studied in index cases using different molecular and next-generation sequencing (NGS) approaches. Candidate allele combinations were analysed using the in silico tools ORVAL and DiGePred. After clinical annotation, 76 out of the 99 cases a priori fulfilled established criteria for diagnosis of BBS or BBS-like. BBS1 alleles, found in 42% of families, were the most represented in our cohort. An increased mutational load was excluded in 41% of the index cases (22/54). Oligogenic inheritance was suspected in 52% of the screened families (23/45), being 40 tested by means of NGS data and 5 only by traditional methods. Together, ORVAL and DiGePred platforms predicted an oligogenic effect in 44% of the triallelic families (10/23). Intrafamilial variable severity could be clinically confirmed in six of the families. Our findings show that the presence of more than two alleles in BBS-associated genes correlated in six families with a more severe phenotype and associated with specific findings, highlighting the role of the mutational load in the management of BBS cases.

摘要

巴德-比德尔综合征(BBS)是一种常染色体隐性遗传性纤毛病,其家族间和家族内存在广泛的变异性,也有关于寡基因相互作用的报道。我们的主要目标是阐明突变负荷在BBS临床变异性中的作用。我们回顾性招募了来自77个不同家庭的99例患者,这些患者在BBS相关基因中存在双等位基因致病性变异。使用人类表型本体术语对临床症状进行注释。使用不同的分子和下一代测序(NGS)方法,对39个BBS相关基因中的索引病例的突变负荷进行了研究。使用计算机工具ORVAL和DiGePred分析候选等位基因组合。经过临床注释,99例病例中有76例事先符合BBS或BBS样疾病的既定诊断标准。在42%的家庭中发现的BBS1等位基因在我们的队列中最为常见。41%的索引病例(22/54)排除了突变负荷增加的情况。52%的筛查家庭(23/45)怀疑存在寡基因遗传,其中40例通过NGS数据进行检测,5例仅通过传统方法检测。ORVAL和DiGePred平台共同预测,44%的三等位基因家庭(10/23)存在寡基因效应。在6个家庭中临床上证实了家族内可变严重程度。我们的研究结果表明,BBS相关基因中存在两个以上等位基因与6个家庭中更严重的表型相关,并与特定发现相关,突出了突变负荷在BBS病例管理中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5267/9283419/330d028c51f0/41525_2022_311_Fig1_HTML.jpg

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