CIC nanoGUNE BRTA, Tolosa Hiribidea 76, 20018 San Sebastián, Spain and Instituto de Fusión Nuclear "Guillermo Velarde," Universidad Politécnica de Madrid, C/ José Gutiérrez Abascal 2, 28006 Madrid, Spain.
J Chem Phys. 2022 Jul 14;157(2):024504. doi: 10.1063/5.0093958.
Despite its simple molecular formula, obtaining an accurate in silico description of water is far from straightforward. Many of its very peculiar properties are quite elusive, and in particular, obtaining good estimations of the diffusion coefficients of the solvated proton and hydroxide at a reasonable computational cost has been an unsolved challenge until now. Here, I present extensive results of several unusually long ab initio molecular dynamics (MD) simulations employing different combinations of the Born-Oppenheimer and second-generation Car-Parrinello MD propagation methods with different ensembles (NVE and NVT) and thermostats, which show that these methods together with the RPBE-D3 functional provide a very accurate estimation of the diffusion coefficients of the solvated HO and OH ions, together with an extremely accurate description of several properties of neutral water (such as the structure of the liquid and its diffusion and shear viscosity coefficients). In addition, I show that the estimations of D and D depend dramatically on the simulation length, being necessary to reach timescales in the order of hundreds of picoseconds to obtain reliable results.
尽管其分子式简单,但要准确地进行计算机模拟描述远非易事。水的许多非常特殊的性质都难以捉摸,特别是在合理的计算成本下,获得溶剂化质子和氢氧根扩散系数的良好估计值一直是一个未解决的挑战。在这里,我展示了几项异常长的从头算分子动力学 (MD) 模拟的广泛结果,这些模拟使用了 Born-Oppenheimer 和第二代 Car-Parrinello MD 传播方法的不同组合,以及不同的系综(NVE 和 NVT)和恒温器,结果表明,这些方法与 RPBE-D3 泛函一起提供了对溶剂化 HO 和 OH 离子扩散系数的非常准确的估计,以及对中性水的几个性质(如液体的结构及其扩散和剪切粘度系数)的极其准确的描述。此外,我还表明,D 和 D 的估计值极大地取决于模拟长度,需要达到数百皮秒量级的时间尺度才能获得可靠的结果。