Department of Microbiology, Adamas University, Barasat-Barrackpore Rd, Kolkata, 700126, India.
Stem Cells and Regenerative Medicine Centre, Yenepoya Research Centre, Mangalore, 575018, India.
Arch Microbiol. 2022 Jul 16;204(8):493. doi: 10.1007/s00203-022-03107-1.
Globin (Gb) domains function in sensing gaseous ligands like oxygen and nitric oxide. In recent years, Gb domain containing heme binding adenylate cyclases (OsAC or GbAC) emerged as significant modulator of Leishmania response to hypoxia and oxidative stress. During progression of life cycle stages, kinetoplastids experience altered condition in insect vectors or other hosts. Moreover, marked diversity in life style has been accounted among kinetoplastids. Distribution and abundance of Gb-domains vary between different groups of kinetoplastids. While in bodonoids, Gbs are not combined with any other functional domains, in trypanosomatids it is either fused with adenylate cyclase (AC) or oxidoreductase (OxR) domains. In salivarian trypanosomatids and Leishmania (Viannia) subtypes, no gene product featuring Gbs can be identified. In this context, evolution of Gb-domains in kinetoplastids was explored. GbOxR derived Gbs clustered with bacterial flavohemoglobins (fHb) including one fHb from Advenella, an endosymbiont of monoxeneous trypanosomatids. Codon adaptation and other evolutionary analysis suggested that OsAC (LmjF.28.0090), the solitary Gb-domain featuring gene product in Leishmania, was acquired via possible horizontal gene transfer. Substantial functional divergence was estimated between orthologues of genes encoding GbAC or GbOxR; an observation also reflected in structural alignment and heme-binding residue predictions. Orthologue-paralogue and synteny analysis indicated genomic reduction in GbOxR and GbAC loci for dixeneous trypanosomatids.
球蛋白 (Gb) 结构域在感应气态配体(如氧气和一氧化氮)方面发挥作用。近年来,含 Gb 结构域的血红素结合腺苷酸环化酶 (OsAC 或 GbAC) 已成为调节利什曼原虫对缺氧和氧化应激反应的重要调节剂。在生命周期阶段的进展过程中,锥虫经历了昆虫载体或其他宿主中条件的改变。此外,锥虫在生活方式上存在显著的多样性。Gb 结构域在不同的锥虫群体之间的分布和丰度存在差异。在 bodonoids 中,Gb 不与任何其他功能结构域结合,而在动基体原虫中,它要么与腺苷酸环化酶 (AC) 或氧化还原酶 (OxR) 结构域融合。在唾液原虫锥虫和利什曼(Viannia)亚型中,无法识别出具有 Gb 结构域的基因产物。在这种情况下,探索了锥虫中 Gb 结构域的进化。衍生自 GbOxR 的 Gbs 与细菌黄素血红蛋白 (fHb) 聚类,包括来自单需氧锥虫共生体 Advenella 的一个 fHb。密码子适应和其他进化分析表明,Leishmania 中唯一具有 Gb 结构域的基因产物 OsAC (LmjF.28.0090) 是通过可能的水平基因转移获得的。编码 GbAC 或 GbOxR 的基因的直系同源物之间估计存在大量的功能分歧;这一观察结果也反映在结构比对和血红素结合残基预测中。直系同源物-旁系同源物和基因座分析表明,双需氧锥虫的 GbOxR 和 GbAC 基因座发生了基因组减少。