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湿地泥炭土壤中的微生物群落结构和产甲烷功能。

Microbial Community Structures and Methanogenic Functions in Wetland Peat Soils.

机构信息

Faculty of Environmental Engineering, The University of Kitakyushu.

Department of Biological Functions Engineering, Graduate School of Life Sciences and Systems Engineering, Kyushu Institute of Technology.

出版信息

Microbes Environ. 2022;37(3). doi: 10.1264/jsme2.ME22004.

DOI:10.1264/jsme2.ME22004
PMID:35851269
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9530717/
Abstract

Methane metabolism in wetlands involves diverse groups of bacteria and archaea, which are responsible for the biological decomposition of organic matter under certain anoxic conditions. Recent advances in environmental omics revealed the phylogenetic diversity of novel microbial lineages, which have not been previously placed in the traditional tree of life. The present study aimed to verify the key players in methane production, either well-known archaeal members or recently identified lineages, in peat soils collected from wetland areas in Japan. Based on an ana-lysis of microbial communities using 16S rRNA gene sequencing and the mole-cular cloning of the functional gene, mcrA, a marker gene for methanogenesis, methanogenic archaea belonging to Methanomicrobiales, Methanosarcinales, Methanobacteriales, and Methanomassiliicoccales were detected in anoxic peat soils, suggesting the potential of CH production in this natural wetland. "Candidatus Bathyarchaeia", archaea with vast metabolic capabilities that is widespread in anoxic environments, was abundant in subsurface peat soils (up to 96% of the archaeal community) based on microbial gene quantification by qPCR. These results emphasize the importance of discovering archaea members outside of traditional methanogenic lineages that may have significant functions in the wetland biogeochemical cycle.

摘要

湿地中的甲烷代谢涉及多种细菌和古菌,它们负责在一定的缺氧条件下生物分解有机物。环境组学的最新进展揭示了新型微生物谱系的系统发育多样性,这些谱系以前未被归入传统的生命之树中。本研究旨在验证在日本湿地地区采集的泥炭土壤中甲烷产生的关键参与者,无论是已知的古菌成员还是最近鉴定的谱系。基于使用 16S rRNA 基因测序分析微生物群落和功能基因 mcrA(甲烷生成的标记基因)的分子克隆,在缺氧泥炭土壤中检测到属于 Methanomicrobiales、Methanosarcinales、Methanobacteriales 和 Methanomassiliicoccales 的产甲烷古菌,表明该自然湿地有 CH 生成的潜力。“Candidatus Bathyarchaeia”是一种在缺氧环境中广泛存在的具有广泛代谢能力的古菌,根据 qPCR 对微生物基因进行定量,在地下泥炭土壤中含量丰富(占古菌群落的 96%)。这些结果强调了发现传统产甲烷谱系之外的古菌成员的重要性,这些成员可能在湿地生物地球化学循环中具有重要功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/61beb64d0a9d/37_22004-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/46535f183605/37_22004-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/97886760fbb1/37_22004-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/61beb64d0a9d/37_22004-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/46535f183605/37_22004-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/97886760fbb1/37_22004-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f068/9530717/61beb64d0a9d/37_22004-g003.jpg

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