School of Life Sciences, Peking University, Beijing 100871, China.
Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China.
Environ Sci Technol. 2022 Aug 2;56(15):10798-10807. doi: 10.1021/acs.est.2c02506. Epub 2022 Jul 20.
Environmental DNA (eDNA) technology has revolutionized biomonitoring in recent years; however, eDNA collection from aquatic environments generally relies on the time-consuming and equipment-dependent process of water filtration. Passive eDNA sampling deploys sorbent materials to capture eDNA from water, circumventing many problems associated with active filtration; yet, very few candidate materials have been systematically evaluated for this purpose. Here, we evaluated the ability of 12 different types of common loose sorbents and filter membranes to capture eDNA in laboratory and field experiments compared with conventional water filtration. Glass fiber filters (GF) outperformed all other materials in laboratory experiments with respect to their quantitative capacity to recover amphibian eDNA, with the eDNA yield increasing linearly with submersion time up to 72 h. Furthermore, GF rapidly (within 0.5 h) captured the eDNA of up to 71% of the total fish species in a lake, in addition to detecting the entire fish community by 8 h, as assessed by metabarcoding analysis. Our results demonstrate that GF could passively capture aqueous eDNA with a similar or greater efficiency than conventional methods, thus paving the way for convenient, effective, and eco-friendly eDNA sampling in aquatic environments.
环境 DNA(eDNA)技术近年来在生物监测领域引发了变革;然而,从水生环境中采集 eDNA 通常依赖于耗时且依赖设备的水过滤过程。被动 eDNA 采样利用吸附材料从水中捕获 eDNA,避免了许多与主动过滤相关的问题;然而,很少有候选材料为此目的进行系统评估。在这里,我们评估了 12 种不同类型的常见松散吸附剂和滤膜与传统水过滤相比,在实验室和野外实验中捕获 eDNA 的能力。玻璃纤维滤器(GF)在实验室实验中相对于其他所有材料在定量回收两栖类动物 eDNA 方面表现更好,eDNA 产量随浸泡时间呈线性增加,最高可达 72 小时。此外,GF 能够快速(在 0.5 小时内)捕获湖中多达 71%的鱼类物种的 eDNA,并且通过 metabarcoding 分析,在 8 小时内检测到整个鱼类群落。我们的结果表明,GF 可以以类似于或更高的效率被动捕获水相 eDNA,从而为水生环境中方便、有效和环保的 eDNA 采样铺平道路。