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靶向 ERK 信号通路抑制 HAND2 基因的表观遗传沉默和结直肠癌肿瘤抑制基因。

Epigenetic silencing and tumor suppressor gene of HAND2 by targeting ERK signaling in colorectal cancer.

机构信息

Department of Colorectal Surgery, Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Diseases, Guangzhou, China.

Guangdong Institute of Gastroenterology, The Sixth Affiliated Hospital of Sun Yat-Sen University, Guangzhou, China.

出版信息

Cell Commun Signal. 2022 Jul 23;20(1):111. doi: 10.1186/s12964-022-00878-4.

Abstract

BACKGROUND

The screening biomarkers for early detection of colorectal cancer (CRC) is lacking. The aim is to identify epigenetic silenced genes and clarify its roles and underlying mechanism in CRC. We conducted integrative analyses of epigenome-wide Human Methylation 450 K arrays and transcriptome to screen out candidate epigenetic driver genes with transcription silencing. Methylated silencing HAND2 were identified and verified in large CRC cohort. The mechanism of HAND2 expression by promoter inhibition were clarified both in vitro and vivo assays. Cell biofunctional roles of HAND2 methylation was investigated in CRC cells. HAND2 reconstitution were constructed by lentivirus plasmid and tumor xenograft model of HAND2 were built subcutaneously. Genomic mRNA analysis by RNA-sequencing and subsequent GSEA analysis were performed to identify potential target of HAND2 and qPCR/WB was conducted to identify the results.

RESULTS

We firstly reported high frequency of HAND2 methylation in promoter in CRC and hypermethylation was negatively correlated with expression silencing and leaded to poor survival in several CRC cohort patients. 5-Aza treatment to demethylated HAND2 could revert its expression in CRC cells. Functionally, HAND2 reconstitution can inhibit cell proliferation, invasion and migration in vitro. In tumor xenograft, HAND2 reconstruction significantly repressed tumor growth when compared to control vector. Thousands of aberrant expressed genes were observed in the heatmap of RNA-sequencing data. HAND2 reconstitution could bind to ERK and reduce its phosphorylation by CoIP assay. These above results showed HAND2 reconstitution perturbed the activation of MAPK/ERK signaling by reduction of ERK phosphorylation.

CONCLUSIONS

HAND2 is one tumor suppressor by targeting ERK signaling and one potential epigenetic driver gene in CRC. Video Abstract.

摘要

背景

目前缺乏用于结直肠癌(CRC)早期检测的筛查生物标志物。本研究旨在鉴定表观遗传沉默基因,并阐明其在 CRC 中的作用和潜在机制。我们对全基因组人类甲基化 450K 芯片和转录组进行了综合分析,筛选出具有转录沉默功能的表观遗传驱动基因。在大型 CRC 队列中鉴定并验证了 HAND2 基因的甲基化沉默。在体外和体内实验中,阐明了 HAND2 表达受启动子抑制的机制。在 CRC 细胞中研究了 HAND2 甲基化的细胞生物功能作用。通过慢病毒质粒构建 HAND2 再表达,并构建 HAND2 肿瘤异种移植模型进行皮下移植。通过 RNA-seq 进行基因组 mRNA 分析和随后的 GSEA 分析,以鉴定 HAND2 的潜在靶基因,并通过 qPCR/WB 进行验证。

结果

我们首次报道了 HAND2 基因在 CRC 启动子中高频率的甲基化,并且超甲基化与表达沉默呈负相关,并导致多个 CRC 队列患者的生存不良。5-Aza 处理去甲基化 HAND2 可以使 CRC 细胞中的 HAND2 表达恢复。功能上,HAND2 再表达可以抑制体外 CRC 细胞的增殖、侵袭和迁移。在肿瘤异种移植模型中,与对照载体相比,HAND2 重建显著抑制肿瘤生长。在 RNA-seq 数据的热图中观察到数千个异常表达的基因。通过 CoIP 测定发现 HAND2 再表达可以与 ERK 结合并减少其磷酸化。这些结果表明 HAND2 再表达通过减少 ERK 磷酸化来干扰 MAPK/ERK 信号通路的激活。

结论

HAND2 是一种通过靶向 ERK 信号通路的肿瘤抑制因子,也是 CRC 中一种潜在的表观遗传驱动基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e707/9308366/e6cb0a971cf9/12964_2022_878_Fig1_HTML.jpg

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