Wang Jing, Wang Chunyan, Xie Haiyang, Feng Xiaoyuan, Wei Lei, Wang Binbin, Li Tengyan, Pi Mingan, Gong Li
Department of Medical Genetics and Developmental Biology, School of Basic Medical Sciences, Capital Medical University, Beijing, China.
Graduate School of Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Front Cardiovasc Med. 2022 Jul 7;9:863650. doi: 10.3389/fcvm.2022.863650. eCollection 2022.
Rare genetic variants have been identified to be important contributors to the risk of Tetralogy of Fallot (TOF), the most common cyanotic congenital heart disease (CHD). But relatively limited familial studies with small numbers of TOF cases have been reported to date. In this study, we aimed to identify novel pathogenic genes and variants that caused TOF in a Chinese family using whole exome sequencing (WES).
A Chinese family whose twins were affected by TOF were recruited for this study. A WES was performed for the affected twins, their healthy brother, and parents to identify the potential pathogenic mutated gene(s). Heterozygous variants carried by the twins, but not the unaffected brother, were retained. Public databases were used to assess the frequencies of the selected variants, and online prediction tools were accessed to predict the influences of these variants on protein function. The final candidate variant was further confirmed by Sanger sequencing in other members of the family.
After several filtering processes, a heterozygous missense variant in the gene (NM_003970.4:c.3097C>T:p.R1033C) was identified and confirmed by Sanger sequencing in the affected twins and their unaffected father, suggesting an inheritance pattern with incomplete penetrance. The variant was found to be extremely rare in the public databases. Furthermore, the mutated site was highly conserved among mammals, and as shown using multiple online prediction tools, this variant was predicted to be a detrimental variant.
We assessed a family with TOF caused by a rare heterozygous missense variant of . Our findings not only further confirm the significant role of genetics in the incidence of TOF but also expand the spectrum of the gene variants that lead to TOF.
罕见基因变异已被确定为法洛四联症(TOF)风险的重要促成因素,法洛四联症是最常见的青紫型先天性心脏病(CHD)。但迄今为止,报道的关于TOF病例数量相对较少的家族性研究较为有限。在本研究中,我们旨在通过全外显子组测序(WES)确定一个中国家庭中导致TOF的新致病基因和变异。
招募了一个双胞胎患TOF的中国家庭参与本研究。对患病双胞胎、他们健康的兄弟以及父母进行全外显子组测序,以确定潜在的致病突变基因。保留双胞胎携带但未患病兄弟未携带的杂合变异。使用公共数据库评估所选变异的频率,并使用在线预测工具预测这些变异对蛋白质功能的影响。最终的候选变异通过桑格测序在该家族的其他成员中进一步确认。
经过多次筛选过程,在基因(NM_003970.4:c.3097C>T:p.R1033C)中鉴定出一个杂合错义变异,并通过桑格测序在患病双胞胎及其未患病的父亲中得到证实,提示一种外显不全的遗传模式。该变异在公共数据库中极为罕见。此外,突变位点在哺乳动物中高度保守,并且如使用多个在线预测工具所示,该变异被预测为有害变异。
我们评估了一个由罕见的杂合错义变异导致TOF的家庭。我们的发现不仅进一步证实了遗传学在TOF发病中的重要作用,还扩展了导致TOF的基因变异谱。