Yu Jiangyong, Fan Zaiwen, Zhou Zhipeng, Zhang Ping, Bai Jing, Li Xu, Tang Min, Fan Nannan, Wu Xiaonan, Nie Xin, Chen Xiaoyan, Ma Di, Chen Xi, Cui Liang, Xia Xuefeng, Yang Ling, Yi Xin, Li Lin
Department of Medical Oncology, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing 100730, China.
Department of Medical Oncology, Air Force Medical Center, PLA, Beijing 100142, China.
Cancers (Basel). 2022 Jul 12;14(14):3382. doi: 10.3390/cancers14143382.
Immunotherapy brought long-term benefits for partial patients with lung squamous cell carcinoma (LUSC). The predictor of anti-PD-L1 therapy was controversial and limited in LUSC. We aimed to explore novel biomarker for LUSC immunotherapy and the potential mechanism. Five hundred and twenty-five Chinese patients (Geneplus cohort) with LUSC underwent targeted sequencing and were involved to explore the genomic profiling. and were the most frequently recurrent genes and correlated to higher tumor mutational burden (TMB). We observed that LUSC patients with and co-wild (co-wild type) were associated with better survival of anti-PD-L1 therapy compared with mutant or mutant (mutant type) in POPAR/OAK cohort. Copy-number variation (CNV) and whole genome doubling (WGD) data from TCGA LUSC cohort were obtained to assess the CNV events. There were fewer CNV alterations and lower chromosome instability in patients with / co-wild compared with those with / mutant. RNA expression data from the TCGA LUSC cohort were collected to explore the differences in RNA expression and tumor immune microenvironment (TIME) between mutant and co-wild groups. The / co-wild type had a significantly increased proportion of multiple tumor-infiltrating lymphocytes (TILs), including activated CD8 T cell, activated dendritic cell (DC), and effector memory CD8 T cell. Immune-related gene sets including checkpoint, chemokine, immunostimulatory, MHC and receptors were enriched in the co-wild type. In conclusion, / co-wild LUSC conferred an elevated response rate in anti-PD-L1 therapy and improved survival, which was associated with a chromosome-stable phenotype and an activated immune microenvironment.
免疫疗法为部分肺鳞状细胞癌(LUSC)患者带来了长期益处。抗程序性死亡受体配体1(PD-L1)疗法的预测指标在LUSC中存在争议且有限。我们旨在探索LUSC免疫疗法的新型生物标志物及其潜在机制。525例中国LUSC患者(Geneplus队列)接受了靶向测序,并参与探索基因组图谱。[基因名称1]和[基因名称2]是最常发生突变的基因,且与较高的肿瘤突变负荷(TMB)相关。我们观察到,在POPAR/OAK队列中,与[基因名称1]突变型或[基因名称2]突变型(突变型)相比,[基因名称1]和[基因名称2]共同野生型(共同野生型)的LUSC患者接受抗PD-L1治疗后的生存期更长。获取了来自癌症基因组图谱(TCGA)LUSC队列的拷贝数变异(CNV)和全基因组加倍(WGD)数据,以评估CNV事件。与[基因名称1]/[基因名称2]突变型患者相比,[基因名称1]/[基因名称2]共同野生型患者的CNV改变较少,染色体不稳定性较低。收集了来自TCGA LUSC队列的RNA表达数据,以探索突变型和共同野生型组之间RNA表达和肿瘤免疫微环境(TIME)的差异。[基因名称1]/[基因名称2]共同野生型中多种肿瘤浸润淋巴细胞(TILs)的比例显著增加,包括活化的CD8 T细胞、活化的树突状细胞(DC)和效应记忆CD8 T细胞。包括检查点、趋化因子、免疫刺激、主要组织相容性复合体(MHC)和受体在内的免疫相关基因集在共同野生型中富集。总之,[基因名称1]/[基因名称2]共同野生型LUSC在抗PD-L1治疗中的反应率升高,生存期改善,这与染色体稳定表型和活化的免疫微环境相关。