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结合神经网络与估计方法预测新冠疫情趋势

Forecasting COVID-19 Epidemic Trends by Combining a Neural Network with Estimation.

作者信息

Cinaglia Pietro, Cannataro Mario

机构信息

Department of Health Sciences, Magna Graecia University of Catanzaro, 88100 Catanzaro, Italy.

Department of Medical and Surgical Sciences, Magna Graecia University of Catanzaro, 88100 Catanzaro, Italy.

出版信息

Entropy (Basel). 2022 Jul 4;24(7):929. doi: 10.3390/e24070929.

Abstract

On 31 December 2019, a cluster of pneumonia cases of unknown etiology was reported in Wuhan (China). The cases were declared to be Coronavirus Disease 2019 (COVID-19) by the World Health Organization (WHO). COVID-19 has been defined as SARS Coronavirus 2 (SARS-CoV-2). Some countries, e.g., Italy, France, and the United Kingdom (UK), have been subjected to frequent restrictions for preventing the spread of infection, contrary to other ones, e.g., the United States of America (USA) and Sweden. The restrictions afflicted the evolution of trends with several perturbations that destabilized its normal evolution. Globally, Rt has been used to estimate time-varying reproduction numbers during epidemics. This paper presents a solution based on Deep Learning (DL) for the analysis and forecasting of epidemic trends in new positive cases of SARS-CoV-2 (COVID-19). It combined a neural network (NN) and an Rt estimation by adjusting the data produced by the output layer of the NN on the related Rt estimation. Tests were performed on datasets related to the following countries: Italy, the USA, France, the UK, and Sweden. Positive case registration was retrieved between 24 February 2020 and 11 January 2022. Tests performed on the Italian dataset showed that our solution reduced the Mean Absolute Percentage Error (MAPE) by 28.44%, 39.36%, 22.96%, 17.93%, 28.10%, and 24.50% compared to other ones with the same configuration but that were based on the LSTM, GRU, RNN, ARIMA (1,0,3), and ARIMA (7,2,4) models, or an NN without applying the Rt as a corrective index. It also reduced MAPE by 17.93%, the Mean Absolute Error (MAE) by 34.37%, and the Root Mean Square Error (RMSE) by 43.76% compared to the same model without the adjustment performed by the Rt. Furthermore, it allowed an average MAPE reduction of 5.37%, 63.10%, 17.84%, and 14.91% on the datasets related to the USA, France, the UK, and Sweden, respectively.

摘要

2019年12月31日,中国武汉报告了一组病因不明的肺炎病例。世界卫生组织(WHO)宣布这些病例为2019冠状病毒病(COVID-19)。COVID-19被定义为严重急性呼吸综合征冠状病毒2(SARS-CoV-2)。一些国家,如意大利、法国和英国,为防止感染传播而频繁实施限制措施,而其他一些国家,如美国和瑞典则不然。这些限制措施给趋势演变带来了若干干扰,破坏了其正常演变。在全球范围内,Rt已被用于估计疫情期间随时间变化的繁殖数。本文提出了一种基于深度学习(DL)的解决方案,用于分析和预测SARS-CoV-2(COVID-19)新确诊病例的疫情趋势。它通过调整神经网络(NN)输出层产生的数据与相关Rt估计值,将神经网络(NN)和Rt估计相结合。对与以下国家相关的数据集进行了测试:意大利、美国、法国、英国和瑞典。检索了2020年2月24日至2022年1月11日期间的确诊病例记录。对意大利数据集进行的测试表明,与其他具有相同配置但基于长短期记忆网络(LSTM)、门控循环单元(GRU)、循环神经网络(RNN)、自回归积分移动平均模型(ARIMA)(1,0,3)和ARIMA(7,2,4)模型,或未将Rt用作校正指标的神经网络相比,我们的解决方案将平均绝对百分比误差(MAPE)降低了28.44%、39.36%、22.96%、17.93%、28.10%和24.50%。与未进行Rt调整的相同模型相比,它还将MAPE降低了17.93%,平均绝对误差(MAE)降低了 34.37%,均方根误差(RMSE)降低了43.76%。此外,它分别使与美国、法国、英国和瑞典相关的数据集的平均MAPE降低了5.37%、63.10%、17.84%和14.91%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9185/9322732/2b11edf856c3/entropy-24-00929-g001.jpg

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