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新种的基因组特征及比较基因组学分析

Genomic Characteristics and Comparative Genomics Analysis of sp. nov.

作者信息

Ilyukhin Evgeny, Markovskaja Svetlana, Elgorban Abdallah M, Al-Rejaie Salim S, Maharachchikumbura Sajeewa S N

机构信息

Department of Biological Sciences, Brock University, St. Catharines, ON L2S 3A1, Canada.

Laboratory of Mycology, Nature Research Centre, LT 08406 Vilnius, Lithuania.

出版信息

J Fungi (Basel). 2022 Jul 14;8(7):732. doi: 10.3390/jof8070732.

DOI:10.3390/jof8070732
PMID:35887487
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9318755/
Abstract

A new ascomycetous species of was isolated from during the survey of diseased trees in Southern Ontario, Canada. The species is morphologically similar to other taxa of (). The new species is different from the extant species in the morphology of ascospores, culture characteristics and molecular data. The novel species is described as sp. nov. based on morphological and multi-gene phylogenetic analyses using a combined set of ITS, LSU, and loci. Additionally, the genome of was sequenced and analyzed. The phylogenomic analysis confirmed the close relationship of the species to the fenestelloid clades of . The comparative genomics analysis revealed that the species lifestyle appears to be multitrophic (necrotrophic or hemi-biotrophic) with a capability to turn pathogenic on a corresponding plant host.

摘要

在对加拿大安大略省南部患病树木的调查中,从[具体来源]分离出一种新的子囊菌物种。该物种在形态上与[相关属]的其他分类群相似([属名])。新物种在子囊孢子形态、培养特征和分子数据方面与现存物种不同。基于使用ITS、LSU、[其他基因位点名称1]和[其他基因位点名称2]位点组合进行的形态学和多基因系统发育分析,将该新物种描述为[物种名称] sp. nov.。此外,对[物种名称]的基因组进行了测序和分析。系统基因组学分析证实了该物种与[相关属]的窗格苔藓虫类分支的密切关系。比较基因组学分析表明,该物种的生活方式似乎是多营养型的(坏死营养型或半活体营养型),具有在相应植物宿主上致病的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/28c2ec60e77a/jof-08-00732-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/9da8c09d8ce2/jof-08-00732-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/29a18125982c/jof-08-00732-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/84b4e3e5a7d6/jof-08-00732-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/131abfd9cbd8/jof-08-00732-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/8f83edfff708/jof-08-00732-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/28c2ec60e77a/jof-08-00732-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/9da8c09d8ce2/jof-08-00732-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/29a18125982c/jof-08-00732-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/84b4e3e5a7d6/jof-08-00732-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/131abfd9cbd8/jof-08-00732-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/8f83edfff708/jof-08-00732-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fe8/9318755/28c2ec60e77a/jof-08-00732-g006.jpg

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