• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

计算机设计的多表位免疫原“Tpme-VAC/LGCM-2022”可能诱导针对感染的细胞免疫和体液免疫。

In Silico Designed Multi-Epitope Immunogen "Tpme-VAC/LGCM-2022" May Induce Both Cellular and Humoral Immunity against Infection.

作者信息

Gomes Lucas Gabriel Rodrigues, Rodrigues Thaís Cristina Vilela, Jaiswal Arun Kumar, Santos Roselane Gonçalves, Kato Rodrigo Bentes, Barh Debmalya, Alzahrani Khalid J, Banjer Hamsa Jameel, Soares Siomar de Castro, Azevedo Vasco, Tiwari Sandeep

机构信息

Laboratory of Cellular and Molecular Genetics (LGCM), PG Program in Bioinformatics, Department of Genetics, Ecology, and Evolution, Institute of Biological Sciences, Federal University of Minas Gerais (UFMG), Belo Horizonte 31270-901, Brazil.

Centre for Genomics and Applied Gene Technology, Institute of Integrative Omics and Applied Biotechnology (IIOAB), Nonakuri, Purba Medinipur 721172, West Bengal, India.

出版信息

Vaccines (Basel). 2022 Jun 25;10(7):1019. doi: 10.3390/vaccines10071019.

DOI:10.3390/vaccines10071019
PMID:35891183
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9320004/
Abstract

Syphilis, a sexually transmitted infection caused by the spirochete , has seen a resurgence over the past years. is capable of early dissemination and immune evasion, and the disease continues to be a global healthcare burden. The purpose of this study was to design a multi-epitope immunogen through an immunoinformatics-based approach. Multi-epitope immunogens constitute carefully selected epitopes belonging to conserved and essential bacterial proteins. Several physico-chemical characteristics, such as antigenicity, allergenicity, and stability, were determined. Further, molecular docking and dynamics simulations were performed, ensuring binding affinity and stability between the immunogen and TLR-2. An in silico cloning was performed using the pET-28a(+) vector and codon adaptation for . Finally, an in silico immune simulation was performed. The in silico predictions obtained in this work indicate that this construct would be capable of inducing the requisite immune response to elicit protection against . Through this methodology we have designed a promising potential vaccine candidate for syphilis, namely Tpme-VAC/LGCM-2022. However, it is necessary to validate these findings in in vitro and in vivo assays.

摘要

梅毒是一种由螺旋体引起的性传播感染疾病,在过去几年中出现了复发。它能够早期传播并逃避免疫,这种疾病仍然是全球医疗保健的负担。本研究的目的是通过基于免疫信息学的方法设计一种多表位免疫原。多表位免疫原由精心挑选的属于保守和必需细菌蛋白的表位组成。确定了几个物理化学特性,如抗原性、致敏性和稳定性。此外,进行了分子对接和动力学模拟,以确保免疫原与TLR-2之间的结合亲和力和稳定性。使用pET-28a(+)载体进行了电子克隆,并对[具体内容缺失]进行了密码子优化。最后,进行了电子免疫模拟。这项工作中获得的电子预测表明,该构建体能够诱导必要的免疫反应以引发针对[具体内容缺失]的保护。通过这种方法,我们设计了一种有前景的梅毒潜在疫苗候选物,即Tpme-VAC/LGCM-2022。然而,有必要在体外和体内试验中验证这些发现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/274f9feea2ff/vaccines-10-01019-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/b716ab71ff20/vaccines-10-01019-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/d4ee7b9df404/vaccines-10-01019-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/13d667661bbd/vaccines-10-01019-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/a53deed51b2c/vaccines-10-01019-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/274f9feea2ff/vaccines-10-01019-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/b716ab71ff20/vaccines-10-01019-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/d4ee7b9df404/vaccines-10-01019-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/13d667661bbd/vaccines-10-01019-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/a53deed51b2c/vaccines-10-01019-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fab/9320004/274f9feea2ff/vaccines-10-01019-g005.jpg

相似文献

1
In Silico Designed Multi-Epitope Immunogen "Tpme-VAC/LGCM-2022" May Induce Both Cellular and Humoral Immunity against Infection.计算机设计的多表位免疫原“Tpme-VAC/LGCM-2022”可能诱导针对感染的细胞免疫和体液免疫。
Vaccines (Basel). 2022 Jun 25;10(7):1019. doi: 10.3390/vaccines10071019.
2
Identification of a Potential Vaccine against Using Subtractive Proteomics and Reverse-Vaccinology Approaches.利用消减蛋白质组学和反向疫苗学方法鉴定一种针对……的潜在疫苗 。 (注:原文中“against”后面似乎缺失了具体的病原体等相关内容)
Vaccines (Basel). 2022 Dec 28;11(1):72. doi: 10.3390/vaccines11010072.
3
An immunoinformatics-based designed multi-epitope candidate vaccine (mpme-VAC/STV-1) against Mycoplasma pneumoniae.一种基于免疫信息学设计的针对肺炎支原体的多表位候选疫苗(mpme-VAC/STV-1)。
Comput Biol Med. 2022 Mar;142:105194. doi: 10.1016/j.compbiomed.2021.105194. Epub 2021 Dec 31.
4
An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach.梅毒螺旋体常见假定疫苗候选物的计算机鉴定:基于反向疫苗学和消减基因组学的方法
Int J Mol Sci. 2017 Feb 14;18(2):402. doi: 10.3390/ijms18020402.
5
Prioritization of potential vaccine candidates and designing a multiepitope-based subunit vaccine against multidrug-resistant Salmonella Typhi str. CT18: A subtractive proteomics and immunoinformatics approach.基于消减蛋白质组学和免疫信息学方法的优先考虑潜在疫苗候选物和设计针对多药耐药伤寒沙门氏菌 CT18 的多表位亚单位疫苗。
Microb Pathog. 2021 Oct;159:105150. doi: 10.1016/j.micpath.2021.105150. Epub 2021 Aug 20.
6
Insight into the invasion process and immune-protective evaluation of Tp0971, a membrane lipoprotein from .深入了解 Tp0971,一种来自 的膜脂蛋白的入侵过程和免疫保护评估。
Microbiol Spectr. 2023 Dec 12;11(6):e0004723. doi: 10.1128/spectrum.00047-23. Epub 2023 Oct 19.
7
Non-pathogenic Borrelia burgdorferi expressing Treponema pallidum TprK and Tp0435 antigens as a novel approach to evaluate syphilis vaccine candidates.表达梅毒密螺旋体 TprK 和 Tp0435 抗原的无致病性伯氏疏螺旋体作为评估梅毒候选疫苗的新方法。
Vaccine. 2019 Mar 22;37(13):1807-1818. doi: 10.1016/j.vaccine.2019.02.022. Epub 2019 Feb 20.
8
An immunoinformatics approach for the design of a multi-epitope vaccine targeting super antigen TSST-1 of Staphylococcus aureus.一种用于设计靶向金黄色葡萄球菌超抗原TSST-1的多表位疫苗的免疫信息学方法。
J Genet Eng Biotechnol. 2021 May 11;19(1):69. doi: 10.1186/s43141-021-00160-z.
9
Development of a multi-epitope peptide vaccine inducing robust T cell responses against brucellosis using immunoinformatics based approaches.使用基于免疫信息学的方法开发一种能诱导针对布鲁氏菌病产生强大T细胞反应的多表位肽疫苗。
Infect Genet Evol. 2017 Jul;51:227-234. doi: 10.1016/j.meegid.2017.04.009. Epub 2017 Apr 11.
10
Development a multi-epitope driven subunit vaccine for immune response reinforcement against Serogroup B of Neisseria meningitidis using comprehensive immunoinformatics approaches.采用综合免疫信息学方法,开发针对脑膜炎奈瑟菌 B 群的多表位驱动亚单位疫苗以增强免疫应答。
Infect Genet Evol. 2019 Nov;75:103992. doi: 10.1016/j.meegid.2019.103992. Epub 2019 Aug 5.

引用本文的文献

1
A comprehensive strategy for the development of a multi-epitope vaccine targeting , utilizing heat shock proteins, encompassing the entire process from vaccine design to evaluation of immunogenicity.一种开发针对……的多表位疫苗的综合策略,利用热休克蛋白,涵盖从疫苗设计到免疫原性评估的整个过程。 (注:原文中“targeting”后缺少具体目标,翻译时保留原文状态)
Front Microbiol. 2025 Mar 19;16:1551437. doi: 10.3389/fmicb.2025.1551437. eCollection 2025.
2
Comprehensive Overview of Outer Membrane Proteins.外膜蛋白概述。
Curr Protein Pept Sci. 2024;25(8):604-612. doi: 10.2174/0113892037293502240328042224.
3
PBIT : A robust and comprehensive tool for screening pathogenic proteomes for drug targets and prioritizing vaccine candidates.

本文引用的文献

1
Linear B-Cell Epitope Prediction for In Silico Vaccine Design: A Performance Review of Methods Available via Command-Line Interface.线性 B 细胞表位预测在计算机疫苗设计中的应用:通过命令行界面提供的方法的性能评估。
Int J Mol Sci. 2021 Mar 22;22(6):3210. doi: 10.3390/ijms22063210.
2
Development of a Multi-Epitope Recombinant Protein for the Diagnosis of Human Visceral Leishmaniasis.用于诊断人类内脏利什曼病的多表位重组蛋白的研发
Iran J Parasitol. 2021 Jan-Mar;16(1):1-10. doi: 10.18502/ijpa.v16i1.5506.
3
Vaccines for Perinatal and Congenital Infections-How Close Are We?
PBIT:一种强大而全面的工具,用于筛选致病性蛋白质组中的药物靶点,并对疫苗候选物进行优先级排序。
Protein Sci. 2024 Feb;33(2):e4892. doi: 10.1002/pro.4892.
4
Bioinformatics analysis and consistency verification of a novel tuberculosis vaccine candidate HP13138PB.新型结核疫苗候选物 HP13138PB 的生物信息学分析和一致性验证。
Front Immunol. 2023 Jan 27;14:1102578. doi: 10.3389/fimmu.2023.1102578. eCollection 2023.
5
Subtractive genomic analysis for computational identification of putative immunogenic targets against clinical Enterobacter cloacae complex.基于消减式基因组分析计算鉴定临床阴沟肠杆菌复合体潜在免疫原性靶标
PLoS One. 2022 Oct 13;17(10):e0275749. doi: 10.1371/journal.pone.0275749. eCollection 2022.
围产期和先天性感染疫苗——我们距离成功还有多远?
Front Pediatr. 2020 Dec 15;8:569. doi: 10.3389/fped.2020.00569. eCollection 2020.
4
The pan-genome of Treponema pallidum reveals differences in genome plasticity between subspecies related to venereal and non-venereal syphilis.苍白密螺旋体的泛基因组揭示了与性病和非性病梅毒相关亚种之间在基因组可塑性方面的差异。
BMC Genomics. 2020 Jan 10;21(1):33. doi: 10.1186/s12864-019-6430-6.
5
The Immune Epitope Database and Analysis Resource Program 2003-2018: reflections and outlook.免疫表位数据库和分析资源计划 2003-2018:反思与展望。
Immunogenetics. 2020 Feb;72(1-2):57-76. doi: 10.1007/s00251-019-01137-6. Epub 2019 Nov 25.
6
Designing a multi-epitope vaccine for cross-protection against Shigella spp: An immunoinformatics and structural vaccinology study.设计针对志贺氏菌属的交叉保护多表位疫苗:免疫信息学和结构疫苗学研究。
Mol Immunol. 2019 Dec;116:106-116. doi: 10.1016/j.molimm.2019.09.018. Epub 2019 Oct 18.
7
Evaluation of the Protective Ability of the Treponema pallidum subsp. Tp0126 OmpW Homolog in the Rabbit Model of Syphilis.梅毒螺旋体亚种Tp0126 OmpW 同源物在兔梅毒模型中的保护能力评估。
Infect Immun. 2019 Jul 23;87(8). doi: 10.1128/IAI.00323-19. Print 2019 Aug.
8
The resurgence of syphilis in high-income countries in the 2000s: a focus on Europe.21 世纪初高收入国家梅毒疫情死灰复燃:以欧洲为例。
Epidemiol Infect. 2019 Jan;147:e143. doi: 10.1017/S0950268819000281.
9
Designing a multi-epitope based vaccine to combat Kaposi Sarcoma utilizing immunoinformatics approach.利用免疫信息学方法设计用于对抗卡波西肉瘤的多表位疫苗。
Sci Rep. 2019 Feb 21;9(1):2517. doi: 10.1038/s41598-019-39299-8.
10
Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes.系统地对肽-MHC 结合预测因子进行基准测试:从合成到天然加工的表位。
PLoS Comput Biol. 2018 Nov 8;14(11):e1006457. doi: 10.1371/journal.pcbi.1006457. eCollection 2018 Nov.