Yonekura Satoru, Ueda Kosuke
Gustave Roussy Cancer Campus (GRCC), 94800 Villejuif, France.
Department of Urology, School of Medicine, Kurume University, Kurume 830-0011, Japan.
Cancers (Basel). 2022 Jul 23;14(15):3596. doi: 10.3390/cancers14153596.
is a protein-coding gene, belonging to the FXYD protein family associated with Na+/K+-ATPase enzymes and chloride ion channels. Accumulating evidence suggests the biological role of in multiple cancers. However, the prognostic value of expression in clear renal cell carcinoma (KIRC) is unclear. Therefore, we evaluated the clinical data with tumor-infiltrating lymphocytes (TILs) and immunoinhibitory gene expression data using The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) dataset (GSE29609). First, the high KIRC patients had distinct clinical characteristics, including age, sex, disease stage, histological grade, and hypoxia-related gene expressions. Next, gene expression was correlated with poor overall survival in both TCGA and GSE29609 cohorts. The ESTIMATE algorithm revealed that higher mRNA levels were associated with increased infiltration of immune cells and tumor purity. Moreover, the high KIRC tissue harbored increased TILs such as B cells, CD8+ T cells, and M1 macrophage, whereas NK cells and neutrophils were decreased. In addition, we showed was co-expressed with several immunoinhibitory genes related to T cell exhaustion such as , , , , and . In conclusion, is an unfavorable prognostic biomarker associated with hypoxia, pro-tumor TILs, and T cell exhaustion.
是一个蛋白质编码基因,属于与Na+/K+-ATP酶和氯离子通道相关的FXYD蛋白家族。越来越多的证据表明其在多种癌症中的生物学作用。然而,其在肾透明细胞癌(KIRC)中的预后价值尚不清楚。因此,我们使用癌症基因组图谱(TCGA)和基因表达综合数据库(GEO)数据集(GSE29609)评估了肿瘤浸润淋巴细胞(TILs)的临床数据和免疫抑制基因表达数据。首先,高表达的KIRC患者具有不同的临床特征,包括年龄、性别、疾病分期、组织学分级和缺氧相关基因表达。其次,在TCGA和GSE29609队列中,基因表达均与较差的总生存期相关。ESTIMATE算法显示,较高的mRNA水平与免疫细胞浸润增加和肿瘤纯度增加相关。此外,高表达的KIRC组织中B细胞、CD8+T细胞和M1巨噬细胞等TILs增加,而NK细胞和中性粒细胞减少。此外,我们发现与几种与T细胞耗竭相关的免疫抑制基因如、、、和共表达。总之,是一种与缺氧、促肿瘤TILs和T细胞耗竭相关的不良预后生物标志物。