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生物信息学和研究结果揭示毛蕊异黄酮治疗心力衰竭和糖尿病的生物靶点。

Bioinformatics and Findings Uncover Bio-Targets of Calycosin Against Heart Failure and Diabetes Mellitus.

机构信息

Cardiology Department, Guigang City People's Hospital, The Eighth Affiliated Hospital of Guangxi Medical University, Guigang, China.

College of Pharmacy, Guangxi Medical University, Nanning, China.

出版信息

Front Endocrinol (Lausanne). 2022 Jul 8;13:790619. doi: 10.3389/fendo.2022.790619. eCollection 2022.

DOI:10.3389/fendo.2022.790619
PMID:35898453
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9309256/
Abstract

BACKGROUND

Heart failure (HF) and diabetes mellitus (DM) are life-threatening diseases. However, existing clinical drugs to treat HF complicated with DM are relatively limited. In this study, we performed a viable bioinformatics strategy combining network pharmacology and molecular docking to identify potential anti-HF and -DM targets and therapeutic mechanisms of calycosin, a functional phytoestrogen.

METHODS

Web-based databases were used to collect candidate genes/targets of calycosin and HF/DM and then identify the hub bio-targets of calycosin against HF/DM. Using the online-available database, all functional processes and signaling pathways of calycosin against HF/DM were screened and identified before further visualization.

RESULTS

All potential bio-targets of calycosin and HF/DM were collected, and 20 hub targets of calycosin against HF/DM were identified. Interestingly, molecular docking findings indicated that mitogen-activated protein kinase-1 (MAPK1), β-arrestin 1 (ARRB1), and homologue-1 (ABL1) may be potent pharmacological targets of calycosin against HF/DM. In addition, all primary molecular functions of calycosin against HF/DM were identified, including regulating protein binding, ubiquitination, and the metabolic process. Furthermore, the top molecular pathways of calycosin against HF/DM were revealed, including cardiomyocyte and chemokine signaling pathways.

CONCLUSION

Our bioinformatics analysis uncovered the network targets and therapeutic mechanisms of calycosin against HF/DM. For the first time, the current findings revealed that the identified hub targets may be used to screen and treat HF/DM.

摘要

背景

心力衰竭(HF)和糖尿病(DM)是危及生命的疾病。然而,现有的治疗 HF 合并 DM 的临床药物相对有限。在这项研究中,我们采用了一种可行的生物信息学策略,结合网络药理学和分子对接,以鉴定染料木素(一种功能性植物雌激素)治疗 HF 和 DM 的潜在靶点和治疗机制。

方法

利用基于网络的数据库收集染料木素和 HF/DM 的候选基因/靶标,然后鉴定染料木素治疗 HF/DM 的关键生物靶标。利用在线可用的数据库,筛选和鉴定了染料木素针对 HF/DM 的所有功能过程和信号通路,然后进行进一步可视化。

结果

收集了所有潜在的染料木素和 HF/DM 的生物靶标,并鉴定了 20 个染料木素针对 HF/DM 的关键靶标。有趣的是,分子对接研究结果表明,丝裂原活化蛋白激酶 1(MAPK1)、β-arrestin 1(ARRB1)和同源物 1(ABL1)可能是染料木素治疗 HF/DM 的潜在药理学靶点。此外,还鉴定了染料木素针对 HF/DM 的所有主要分子功能,包括调节蛋白质结合、泛素化和代谢过程。此外,揭示了染料木素针对 HF/DM 的主要分子途径,包括心肌细胞和趋化因子信号通路。

结论

我们的生物信息学分析揭示了染料木素治疗 HF/DM 的网络靶点和治疗机制。首次发现,鉴定的关键靶标可用于筛选和治疗 HF/DM。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/f7496078b6e9/fendo-13-790619-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/08b0f6163391/fendo-13-790619-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/2c5d574f843b/fendo-13-790619-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/058e8870f63c/fendo-13-790619-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/f228cc5e4460/fendo-13-790619-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/64c434e97af4/fendo-13-790619-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/f7496078b6e9/fendo-13-790619-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/08b0f6163391/fendo-13-790619-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/2c5d574f843b/fendo-13-790619-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/058e8870f63c/fendo-13-790619-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/f228cc5e4460/fendo-13-790619-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/64c434e97af4/fendo-13-790619-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3632/9309256/f7496078b6e9/fendo-13-790619-g006.jpg

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