Department of Computer Science, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand.
Center of Excellence in Systems Biology, Faculty of Medicine, Chulalongkorn University, Bangkok, 10330, Thailand.
Sci Rep. 2022 Jul 30;12(1):13140. doi: 10.1038/s41598-022-17300-1.
Snakebite, classified by World Health Organization as a neglected tropical disease, causes more than 100,000 deaths and 2 million injuries per year. Currently, available antivenoms do not bind with strong specificity to target toxins, which means that severe complications can still occur despite treatment. Moreover, the cost of antivenom is expensive. Knowledge of venom compositions is fundamental for producing a specific antivenom that has high effectiveness, low side effects, and ease of manufacture. With advances in mass spectrometry techniques, venom proteomes can now be analyzed in great depth at high efficiency. However, these techniques require genomic and transcriptomic data for interpreting mass spectrometry data. This study aims to establish and incorporate genomics, transcriptomics, and proteomics data to study venomics of a venomous snake, Daboia siamensis. Multiple proteins that have not been reported as venom components of this snake such as hyaluronidase-1, phospholipase B, and waprin were discovered. Thus, multi-omics data are advantageous for venomics studies. These findings will be valuable not only for antivenom production but also for the development of novel therapeutics.
蛇伤被世界卫生组织列为被忽视的热带病,每年导致超过 10 万人死亡和 200 万人受伤。目前,可用的抗蛇毒血清不能与目标毒素具有很强的特异性结合,这意味着尽管进行了治疗,仍可能发生严重的并发症。此外,抗蛇毒血清的成本昂贵。了解毒液成分对于生产具有高效、低副作用和易于制造的特异性抗蛇毒血清至关重要。随着质谱技术的进步,现在可以高效率地深入分析毒液蛋白质组。然而,这些技术需要基因组和转录组数据来解释质谱数据。本研究旨在建立并整合基因组学、转录组学和蛋白质组学数据,以研究一种毒蛇——圆斑蝰蛇的毒液组学。发现了多种以前未报道为该蛇毒液成分的蛋白质,如透明质酸酶-1、磷脂酶 B 和 waprin。因此,多组学数据有利于毒液组学研究。这些发现不仅对抗蛇毒血清的生产有价值,而且对新型治疗药物的开发也有价值。