Zhou Quanwei, Wei Min, Shen Wenyue, Huang Sheng, Fan Jianfeng, Huang He
Department of Neurosurgery, Xiangya Hospital, Central South University, Changsha, China.
National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China.
Front Genet. 2022 Jul 15;13:899883. doi: 10.3389/fgene.2022.899883. eCollection 2022.
Diffuse glioma, the most common intracranial malignant tumor, is characterized by immunosuppression. The prognostic significance and potential therapeutic value of SYK remain obscure. Here, we explored the performance of SYK in predicting patient outcomes and as a therapeutic target. The mRNA expression and clinical data for pancancer and normal tissues and more than 2,000 glioma samples were collected from public databases. The expression level of SYK was evaluated by qPCR and IHC. The prognostic value of SYK was assessed using the Kaplan-Meier curves and univariate and multivariate Cox regression analyses. A sequence of immune and stromal infiltration analyses was calculated based on the ESTIMATE algorithm, ssGSEA algorithm, TIMER, and single-cell analysis. The SYK-related subtypes were identified a Consensus Cluster Plus analysis. SYK was significantly differentially expressed in multiple tumors and normal tissues. Importantly, high-expression SYK was enriched in malignant phenotypes of diffuse gliomas, which was further validated by qPCR and IHC. Survival analysis uncovered that SYK was an independently unfavorable prognostic marker in diffuse glioma. Functional enrichment analysis and immune and stromal infiltration analyses showed that SYK was involved in shaping the immunosuppressive microenvironment of diffuse glioma. Additionally, SYK expression was closely associated with some immune checkpoint molecules and M2 macrophage infiltration, which was validated by IHC and single-cell analysis. Diffuse glioma with Sub1 exhibited a worse prognosis, immunosuppressive microenvironment, and higher expression of immune checkpoint genes. SYK is involved in shaping the immunosuppressive microenvironment and served as a promising prognosis biomarker and immunotherapeutic target for diffuse glioma.
弥漫性胶质瘤是最常见的颅内恶性肿瘤,其特征为免疫抑制。脾酪氨酸激酶(SYK)的预后意义和潜在治疗价值仍不清楚。在此,我们探讨了SYK在预测患者预后以及作为治疗靶点方面的表现。从公共数据库收集了泛癌和正常组织以及2000多个胶质瘤样本的mRNA表达和临床数据。通过定量聚合酶链反应(qPCR)和免疫组织化学(IHC)评估SYK的表达水平。使用Kaplan-Meier曲线以及单因素和多因素Cox回归分析评估SYK的预后价值。基于ESTIMATE算法、单样本基因集富集分析(ssGSEA)算法、肿瘤免疫评估资源(TIMER)和单细胞分析进行了一系列免疫和基质浸润分析。通过一致性聚类加分析确定了SYK相关亚型。SYK在多种肿瘤和正常组织中存在显著差异表达。重要的是,高表达的SYK在弥漫性胶质瘤的恶性表型中富集,这通过qPCR和IHC进一步得到验证。生存分析发现,SYK是弥漫性胶质瘤中一个独立的不良预后标志物。功能富集分析以及免疫和基质浸润分析表明,SYK参与塑造弥漫性胶质瘤的免疫抑制微环境。此外,SYK表达与一些免疫检查点分子和M2巨噬细胞浸润密切相关,这通过IHC和单细胞分析得到验证。具有Sub1的弥漫性胶质瘤表现出更差的预后、免疫抑制微环境以及更高的免疫检查点基因表达。SYK参与塑造免疫抑制微环境,是弥漫性胶质瘤一个有前景的预后生物标志物和免疫治疗靶点。