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通过缺失分析和高级分子建模对密螺旋体(Treponema denticola)主要表面蛋白(Msp)进行表征。

Characterization of Treponema denticola Major Surface Protein (Msp) by Deletion Analysis and Advanced Molecular Modeling.

机构信息

Department of Biologic and Materials Sciences and Prosthodontics, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA.

Department of Computational Medicine and Bioinformatics, School of Medicine, University of Michigan, Ann Arbor, Michigan, USA.

出版信息

J Bacteriol. 2022 Sep 20;204(9):e0022822. doi: 10.1128/jb.00228-22. Epub 2022 Aug 1.

DOI:10.1128/jb.00228-22
PMID:35913147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9487533/
Abstract

Treponema denticola, a keystone pathogen in periodontitis, is a model organism for studying Treponema physiology and host-microbe interactions. Its major surface protein Msp forms an oligomeric outer membrane complex that binds fibronectin, has cytotoxic pore-forming activity, and disrupts several intracellular processes in host cells. T. denticola is an ortholog of the Treponema pallidum to - gene family that includes , whose remarkable hypervariability is proposed to contribute to T. pallidum immune evasion. We recently identified the primary Msp surface-exposed epitope and proposed a model of the Msp protein as a β-barrel protein similar to Gram-negative bacterial porins. Here, we report fine-scale Msp mutagenesis demonstrating that both the N and C termini as well as the centrally located Msp surface epitope are required for native Msp oligomer expression. Removal of as few as three C-terminal amino acids abrogated Msp detection on the T. denticola cell surface, and deletion of four residues resulted in complete loss of detectable Msp. Substitution of a FLAG tag for either residues 6 to 13 of mature Msp or an 8-residue portion of the central Msp surface epitope resulted in expression of full-length Msp but absence of the oligomer, suggesting roles for both domains in oligomer formation. Consistent with previously reported Msp N-glycosylation, proteinase K treatment of intact cells released a 25 kDa polypeptide containing the Msp surface epitope into culture supernatants. Molecular modeling of Msp using novel metagenome-derived multiple sequence alignment (MSA) algorithms supports the hypothesis that Msp is a large-diameter, trimeric outer membrane porin-like protein whose potential transport substrate remains to be identified. The Treponema denticola gene encoding its major surface protein (Msp) is an ortholog of the T. pallidum to - gene family that includes , whose remarkable hypervariability is proposed to contribute to T. pallidum immune evasion. Using a combined strategy of fine-scale mutagenesis and advanced predictive molecular modeling, we characterized the Msp protein and present a high-confidence model of its structure as an oligomer embedded in the outer membrane. This work adds to knowledge of Msp-like proteins in oral treponemes and may contribute to understanding the evolutionary and potential functional relationships between T. denticola Msp and the orthologous T. pallidum Tpr proteins.

摘要

齿密螺旋体是牙周炎的关键病原体,是研究密螺旋体生理和宿主微生物相互作用的模式生物。其主要表面蛋白 Msp 形成一种寡聚的外膜复合物,与纤维连接蛋白结合,具有细胞毒性的孔形成活性,并破坏宿主细胞中的几个细胞内过程。T. denticola 是梅毒螺旋体 至 -基因家族的同源物,包括 ,其显著的高变异性被认为有助于梅毒螺旋体的免疫逃避。我们最近确定了主要的 Msp 表面暴露表位,并提出了 Msp 蛋白的模型作为一种类似于革兰氏阴性细菌孔道的β-桶状蛋白。在这里,我们报告了精细的 Msp 诱变实验,证明 N 和 C 末端以及中央位置的 Msp 表面表位都需要天然 Msp 寡聚体的表达。去除多达三个 C 末端氨基酸会使 T. denticola 细胞表面的 Msp 检测消失,而删除四个残基会导致可检测到的 Msp 完全丧失。用 FLAG 标签替代成熟 Msp 的残基 6 至 13 或中央 Msp 表面表位的 8 个残基会导致全长 Msp 的表达,但不存在寡聚体,表明这两个结构域都在寡聚体形成中发挥作用。与先前报道的 Msp N-糖基化一致,用蛋白酶 K 处理完整细胞会将包含 Msp 表面表位的 25 kDa 多肽释放到培养上清液中。使用新的基于宏基因组的多重序列比对 (MSA) 算法对 Msp 进行分子建模,支持 Msp 是一种大直径、三聚体外膜孔道样蛋白的假设,其潜在的转运底物有待确定。T. denticola 编码其主要表面蛋白 (Msp) 的基因是 T. pallidum 至 -基因家族的同源物,包括 ,其显著的高变异性被认为有助于梅毒螺旋体的免疫逃避。我们采用精细的突变策略和先进的预测分子建模相结合的方法,对 Msp 蛋白进行了表征,并提出了其结构的高可信度模型,即一种嵌入外膜的寡聚体。这项工作增加了对口腔密螺旋体中 Msp 样蛋白的了解,并可能有助于理解 T. denticola Msp 与同源的 T. pallidum Tpr 蛋白之间的进化和潜在功能关系。

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