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基于条件生成对抗网络和熵损失的临床前/临床磁共振成像回溯运动校正。

Retrospective motion correction for preclinical/clinical magnetic resonance imaging based on a conditional generative adversarial network with entropy loss.

机构信息

State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

NMR Biomed. 2022 Dec;35(12):e4809. doi: 10.1002/nbm.4809. Epub 2022 Aug 30.

DOI:10.1002/nbm.4809
PMID:35925046
Abstract

Multishot scan magnetic resonance imaging (MRI) acquisition is inherently sensitive to motion, and motion artifact reduction is essential for improving the image quality in MRI. This work proposes and validates a new end-to-end motion-correction method for the multishot sequence that incorporates a conditional generative adversarial network with minimum entropy (cGANME) of MR images. The cGANME contains an encoder-decoder generator to obtain motion-corrected images and a PatchGAN discriminator to classify the image as either real (motion-free) or fake (motion-corrected). The entropy of the images is set as one loss item in the cGAN's loss as the entropy increases monotonically with the motion artifacts. An ablation experiment of the different weights of entropy loss was performed to evaluate the function of entropy loss. The preclinical dataset was acquired with a fast spin echo pulse sequence on a 7.0-T scanner. After the simulation, we had 10,080/2880/1440 slices for training, testing, and validating, respectively. The clinical dataset was downloaded from the Human Connection Project website, and 11,300/3500/2000 slices were used for training, testing, and validating after simulation, respectively. Extensive experiments for different motion patterns, motion levels, and protocol parameters demonstrate that cGANME outperforms traditional and some state-of-the-art, deep learning-based methods. In addition, we tested cGANME on in vivo awake rats and mitigated the motion artifacts, indicating that the model has some generalizability.

摘要

多shot 扫描磁共振成像(MRI)采集本身对运动敏感,减少运动伪影对于提高 MRI 图像质量至关重要。这项工作提出并验证了一种新的端到端运动校正方法,用于多 shot 序列,该方法结合了条件生成对抗网络和最小熵(cGANME)的 MR 图像。cGANME 包含一个编码器-解码器生成器来获得运动校正图像和一个 PatchGAN 鉴别器来将图像分类为真实(无运动)或伪造(运动校正)。图像的熵被设置为 cGAN 损失的一个损失项,因为熵随着运动伪影的增加而单调增加。进行了不同熵损失权重的消融实验,以评估熵损失的功能。临床前数据集是在 7.0-T 扫描仪上使用快速自旋回波脉冲序列采集的。模拟后,我们分别有 10080/2880/1440 个切片用于训练、测试和验证。临床数据集从人类连接项目网站下载,模拟后分别使用 11300/3500/2000 个切片用于训练、测试和验证。针对不同的运动模式、运动水平和协议参数进行了广泛的实验,结果表明 cGANME 优于传统方法和一些基于深度学习的最新方法。此外,我们还在活体清醒大鼠上测试了 cGANME,并减轻了运动伪影,表明该模型具有一定的泛化能力。

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