• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

全基因组系统发育揭示了感染驯化和野生禾本科植物的物种之间的关系。

Genome-scale phylogenies reveal relationships among species infecting domesticated and wild grasses.

作者信息

Croll D, Crous P W, Pereira D, Mordecai E A, McDonald B A, Brunner P C

机构信息

Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, CH-2000 Neuchâtel, Switzerland.

Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.

出版信息

Persoonia. 2021 Jun;46:116-128. doi: 10.3767/persoonia.2021.46.04. Epub 2021 Feb 14.

DOI:10.3767/persoonia.2021.46.04
PMID:35935891
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9311395/
Abstract

Several plant pathogenic species have been identified infecting wheat and other cereals over the past 50 years. As new lineages were discovered, naming conventions grew unwieldy and the relationships with previously recognized species remained unclear. We used genome sequencing to clarify relationships among these species and provided new names for most of these species. Six of the nine described species were recovered from wheat, with five of these species coming from Iran. Genome sequences revealed that three strains thought to be hybrids between and were not actually hybrids, but rather represented rare gene introgressions between those species. Our data are consistent with the hypothesis that originated as a pathogen of wild grasses in the Fertile Crescent, then emerged as a wheat pathogen via host-tracking during the domestication of wheat in the same region. The discovery of a diverse array of species infecting wheat in Iran suggests that new wheat pathogens could emerge from this region in the future. : Croll D, Crous PW, Pereira D, et al. 2021. Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses. Persoonia 46: 116-128. https://doi.org/10.3767/persoonia.2021.46.04.

摘要

在过去50年里，已鉴定出几种感染小麦和其他谷物的植物致病物种。随着新谱系的发现，命名惯例变得繁琐，与先前公认物种的关系仍不明确。我们利用基因组测序来厘清这些物种之间的关系，并为其中大多数物种提供了新名称。九个已描述物种中的六个是从小麦中分离出来的，其中五个物种来自伊朗。基因组序列显示，三个被认为是[两个物种名称未给出]之间杂交种的菌株实际上并非杂交种，而是代表了这些物种之间罕见的基因渗入。我们的数据与以下假设一致：[物种名称未给出]起源于新月沃地的野生禾本科植物病原体，然后在同一地区小麦驯化过程中通过宿主追踪成为小麦病原体。在伊朗发现多种感染小麦的[物种名称未给出]物种表明，未来该地区可能会出现新的小麦病原体。：克罗尔D、克劳斯PW、佩雷拉D等。2021年。基因组尺度系统发育揭示感染驯化和野生禾本科植物的拟茎点霉属物种之间的关系。《佩尔索尼亚》46：116 - 128。https://doi.org/10.3767/persoonia.2021.46.04 。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/570ae6acfbac/per-46-4-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/cceb361f942e/per-46-4-app-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/0498bc6c1c85/per-46-4-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/541ed1f56bd6/per-46-4-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/7718699c3cea/per-46-4-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/536f50e5c30c/per-46-4-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/73526847af25/per-46-4-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/a13057f3d0cc/per-46-4-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/697fe24602ec/per-46-4-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/55d376d8323b/per-46-4-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/79cf80cd31b3/per-46-4-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/3b9de9b18f71/per-46-4-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/f9a124cb6666/per-46-4-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/570ae6acfbac/per-46-4-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/cceb361f942e/per-46-4-app-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/0498bc6c1c85/per-46-4-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/541ed1f56bd6/per-46-4-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/7718699c3cea/per-46-4-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/536f50e5c30c/per-46-4-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/73526847af25/per-46-4-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/a13057f3d0cc/per-46-4-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/697fe24602ec/per-46-4-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/55d376d8323b/per-46-4-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/79cf80cd31b3/per-46-4-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/3b9de9b18f71/per-46-4-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/f9a124cb6666/per-46-4-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/48ce/9311395/570ae6acfbac/per-46-4-g012.jpg

相似文献

1
Genome-scale phylogenies reveal relationships among species infecting domesticated and wild grasses.全基因组系统发育揭示了感染驯化和野生禾本科植物的物种之间的关系。
Persoonia. 2021 Jun;46:116-128. doi: 10.3767/persoonia.2021.46.04. Epub 2021 Feb 14.
2
Genetic mapping using a wheat multi-founder population reveals a locus on chromosome 2A controlling resistance to both leaf and glume blotch caused by the necrotrophic fungal pathogen Parastagonospora nodorum.利用小麦多祖群体进行遗传图谱定位，揭示了控制 2A 染色体上叶枯病和颖枯病的抗坏死真菌病原体禾谷多腔菌的位点。
Theor Appl Genet. 2020 Mar;133(3):785-808. doi: 10.1007/s00122-019-03507-w. Epub 2020 Jan 29.
3
Biology and molecular interactions of Parastagonospora nodorum blotch of wheat.小麦颖枯病病原菌的生物学和分子互作。
Planta. 2021 Dec 16;255(1):21. doi: 10.1007/s00425-021-03796-w.
4
A genome-wide survey of the secondary metabolite biosynthesis genes in the wheat pathogen .对小麦病原体中次生代谢物生物合成基因的全基因组调查。
Mycology. 2014 Jul 3;5(3):192-206. doi: 10.1080/21501203.2014.928386. Epub 2014 Jun 24.
5
Genetic Structure of the Norwegian Population.挪威人口的基因结构。
Front Microbiol. 2020 Jun 16;11:1280. doi: 10.3389/fmicb.2020.01280. eCollection 2020.
6
Septoria Nodorum Blotch of Wheat: Disease Management and Resistance Breeding in the Face of Shifting Disease Dynamics and a Changing Environment.小麦颖枯病：面对不断变化的病害动态和变化的环境，如何进行病害管理和抗性育种。
Phytopathology. 2021 Jun;111(6):906-920. doi: 10.1094/PHYTO-07-20-0280-RVW. Epub 2021 Jul 27.
7
Sizing up Septoria.评估叶点霉。
Stud Mycol. 2013 Jun 30;75(1):307-90. doi: 10.3114/sim0017.
8
Reference Quality Genome Assemblies of Three Isolates Differing in Virulence on Wheat.三种对小麦致病力不同的分离株的参考质量基因组组装
G3 (Bethesda). 2018 Feb 2;8(2):393-399. doi: 10.1534/g3.117.300462.
9
Soft wheat cultivars grown in the Saratov region and their resistance to Septoria blotch.萨拉托夫地区种植的软质小麦品种及其对叶斑病的抗性。
Vavilovskii Zhurnal Genet Selektsii. 2023 Oct;27(6):582-590. doi: 10.18699/VJGB-23-70.
10
Interaction between the Bird Cherry-Oat Aphid () and Stagonospora Nodorum Blotch () on Wheat.禾谷缢管蚜与小麦颖枯病菌在小麦上的相互作用。
Insects. 2021 Jan 6;12(1):35. doi: 10.3390/insects12010035.

引用本文的文献

1
Two new species of and a new species of (Phaeosphaeriaceae, Pleosporales) from grasslands in Yunnan Province, China.来自中国云南省草原的两种新的 和一种新的 （格孢腔菌科，格孢腔菌目）。
MycoKeys. 2024 Oct 10;109:239-263. doi: 10.3897/mycokeys.109.134136. eCollection 2024.
2
Metabolome and Mycobiome of Subspecies Differing in Susceptibility to Brown Rust and Powdery Mildew Are Diverse.对褐锈病和白粉病易感性不同的亚种的代谢组和真菌群落是多样的。
Plants (Basel). 2024 Aug 23;13(17):2343. doi: 10.3390/plants13172343.
3
Effects of Grazing and Leaf Spot Disease on the Structure and Diversity of Phyllosphere Microbiome Communities in .

本文引用的文献

1
Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen.转座元件激活的群体基因组学研究在农业病原菌高度抑制的基因组中
Microb Genom. 2021 Aug;7(8). doi: 10.1099/mgen.0.000540.
2
The Genetic Architecture of Emerging Fungicide Resistance in Populations of a Global Wheat Pathogen.新兴杀菌剂在全球小麦病原体种群中抗药性的遗传结构。
Genome Biol Evol. 2020 Dec 6;12(12):2231-2244. doi: 10.1093/gbe/evaa203.
3
Natural selection drives population divergence for local adaptation in a wheat pathogen.
放牧和叶斑病对[具体地点]叶际微生物群落结构和多样性的影响
Plants (Basel). 2024 Aug 1;13(15):2128. doi: 10.3390/plants13152128.
4
What are the 100 most cited fungal genera?被引用次数最多的100个真菌属有哪些？
Stud Mycol. 2024 Jul;108:1-411. doi: 10.3114/sim.2024.108.01. Epub 2024 Jul 15.
5
Fungi of quarantine concern for China I: .中国检疫关注的真菌I：.
Persoonia. 2021 Dec;47:45-105. doi: 10.3767/persoonia.2021.47.02. Epub 2021 Aug 25.
6
Phylogenetic Analysis of Phaeosphaeria Species Using Mating Type Genes and Distribution of Mating Types in Iran.利用交配型基因对球腔菌属物种进行系统发育分析及伊朗交配型的分布
Plant Pathol J. 2022 Apr;38(2):78-89. doi: 10.5423/PPJ.OA.10.2021.0154. Epub 2022 Apr 1.
自然选择驱动小麦病原菌的种群分歧以适应局部环境。
Fungal Genet Biol. 2020 Aug;141:103398. doi: 10.1016/j.fgb.2020.103398. Epub 2020 May 1.
4
Using ggtree to Visualize Data on Tree-Like Structures.使用 ggtree 可视化树状结构数据。
Curr Protoc Bioinformatics. 2020 Mar;69(1):e96. doi: 10.1002/cpbi.96.
5
OrthoFinder: phylogenetic orthology inference for comparative genomics.OrthoFinder：用于比较基因组学的系统发育直系同源推断。
Genome Biol. 2019 Nov 14;20(1):238. doi: 10.1186/s13059-019-1832-y.
6
A specific fungal transcription factor controls effector gene expression and orchestrates the establishment of the necrotrophic pathogen lifestyle on wheat.一种特定的真菌转录因子控制效应基因的表达，并协调坏死营养型病原菌在小麦上建立生活方式。
Sci Rep. 2019 Nov 4;9(1):15884. doi: 10.1038/s41598-019-52444-7.
7
Genera of phytopathogenic fungi: GOPHY 3.植物病原真菌属：GOPHY 3。
Stud Mycol. 2019 Jun 13;94:1-124. doi: 10.1016/j.simyco.2019.05.001. eCollection 2019 Sep.
8
Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States.本地化适应推动了美国小麦真菌病原菌禾旋孢腔菌效应因子的多样化。
PLoS Genet. 2019 Oct 18;15(10):e1008223. doi: 10.1371/journal.pgen.1008223. eCollection 2019 Oct.
9
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference.RAxML-NG：用于最大似然系统发育推断的快速、可扩展和用户友好的工具。
Bioinformatics. 2019 Nov 1;35(21):4453-4455. doi: 10.1093/bioinformatics/btz305.
10
Whole-Genome Annotation with BRAKER.使用BRAKER进行全基因组注释。
Methods Mol Biol. 2019;1962:65-95. doi: 10.1007/978-1-4939-9173-0_5.