Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.
Helmholtz Institute for Pharmaceutical Research, Helmholtz Center for Infection Research, Saarbrücken, 66123, Germany.
Chem Asian J. 2022 Oct 4;17(19):e202200591. doi: 10.1002/asia.202200591. Epub 2022 Aug 24.
The tool kit for label-free single-molecule sensing, nucleic acid sequencing (DNA, RNA and protein) and other biotechnological applications has been significantly broadened due to the wide range of available nanopore-based technologies. Currently, various sources of nanopores, including biological, fabricated solid-state, hybrid and recently de novo chemically synthesized ion-like channels have put in use for rapid single-molecule sensing of biomolecules and other diagnostic applications. At length scales of hundreds of nanometers, DNA nanotechnology, particularly DNA origami-based devices, enables the assembly of complex and dynamic 3-dimensional nanostructures, including nanopores with precise control over the size/shape. DNA origami technology has enabled to construct nanopores by DNA alone or hybrid architects with solid-state nanopore devices or nanocapillaries. In this review, we briefly discuss the nanopore technique that uses DNA nanotechnology to construct such individual pores in lipid-based systems or coupled with other solid-state devices, nanocapillaries for enhanced biosensing function. We summarize various DNA-based design nanopores and explore the sensing properties of such DNA channels. Apart from DNA origami channels we also pointed the design principles of RNA nanopores for peptide sensing applications.
由于各种基于纳米孔的技术的广泛应用,用于无标记单分子传感、核酸测序(DNA、RNA 和蛋白质)和其他生物技术应用的工具包已经大大扩展。目前,各种纳米孔源,包括生物、制造的固态、混合和最近新合成的化学离子通道,已经用于快速单分子生物分子传感和其他诊断应用。在数百纳米的长度尺度上,DNA 纳米技术,特别是基于 DNA 折纸的器件,能够组装复杂和动态的 3 维纳米结构,包括具有精确尺寸/形状控制的纳米孔。DNA 折纸技术能够通过 DNA 本身或与固态纳米孔器件或纳米毛细管混合的建筑结构构建纳米孔。在这篇综述中,我们简要讨论了使用 DNA 纳米技术在基于脂质的系统中构建此类单个孔或与其他固态器件、纳米毛细管结合以增强生物传感功能的纳米孔技术。我们总结了各种基于 DNA 的设计纳米孔,并探索了这种 DNA 通道的传感特性。除了 DNA 折纸通道,我们还指出了用于肽传感应用的 RNA 纳米孔的设计原则。