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全面的生物信息学分析 MMP1 在肝癌中的作用并建立相关预后模型。

Comprehensive bioinformatic analysis of MMP1 in hepatocellular carcinoma and establishment of relevant prognostic model.

机构信息

Department of Hepatopancreatobiliary Surgery, Ningbo Medical Centre Lihuili Hospital, Ningbo University, 1111 Jiangnan Road, Ningbo, 315040, Zhejiang, China.

Department of Emergency, Ningbo Medical Centre Lihuili Hospital, Ningbo University, Ningbo, 315040, Zhejiang, China.

出版信息

Sci Rep. 2022 Aug 10;12(1):13639. doi: 10.1038/s41598-022-17954-x.

Abstract

Matrix metalloproteinase 1 (MMP1) encodes endopeptidases associated with degradation of multiple components of the extracellular matrix. This function has increasingly been considered to play a major proteolysis role in tumor invasion and metastasis. However, the relationship between MMP1 gene expression, tumor-immune microenvironment and prognosis in hepatocellular carcinoma patients remains mostly unclear. This study focused on a comprehensive analysis of MMP1 in hepatocellular carcinoma, specifically the prognosis and tumor-immune microenvironment. MMP1 expression was analyzed using TCGA database and clinical samples. MMP1 associated mechanisms, pathways, mutations and prognosis in hepatocellular carcinoma were evaluated. We also analyzed the tumor-immune microenvironment and corresponding treatments. Our research demonstrated that MMP1 expression was upregulated in patients with hepatocellular carcinoma and correlated with poor survival. A prognostic model was established and its performance evaluated. We also found and report various correlations between MMP1 and immune-related cells/genes, as well the potential therapeutic agents. These findings indicate that MMP1 can potentially be a promising prognostic biomarker and indicator of the tumor-immune microenvironment status in hepatocellular carcinoma.

摘要

基质金属蛋白酶 1(MMP1)编码与细胞外基质多种成分降解相关的内肽酶。这一功能逐渐被认为在肿瘤侵袭和转移中发挥主要的蛋白水解作用。然而,MMP1 基因表达与肝癌患者的肿瘤免疫微环境和预后之间的关系在很大程度上仍不清楚。本研究专注于对肝癌中 MMP1 的全面分析,特别是对其预后和肿瘤免疫微环境的分析。我们使用 TCGA 数据库和临床样本分析了 MMP1 的表达。评估了 MMP1 相关机制、途径、突变和肝癌的预后。我们还分析了肿瘤免疫微环境及其相应的治疗方法。我们的研究表明,肝癌患者中 MMP1 的表达上调,与不良预后相关。我们建立了一个预后模型并评估了其性能。我们还发现并报告了 MMP1 与免疫相关细胞/基因之间的各种相关性,以及潜在的治疗药物。这些发现表明,MMP1 可能是肝癌中一种有前途的预后生物标志物和肿瘤免疫微环境状态的指标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6dff/9365786/de774aea80cf/41598_2022_17954_Fig1_HTML.jpg

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