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一种新型 m6A 相关长链非编码 RNA 标志物,用于预测肺腺癌患者的预后、化疗和免疫治疗反应。

A Novel m6A-Related LncRNA Signature for Predicting Prognosis, Chemotherapy and Immunotherapy Response in Patients with Lung Adenocarcinoma.

机构信息

Institute for Pathology, University Hospital of Cologne, 50937 Cologne, Germany.

Department of Thoracic Surgery, Zhujiang Hospital, Southern Medical University, Guangzhou 510282, China.

出版信息

Cells. 2022 Aug 3;11(15):2399. doi: 10.3390/cells11152399.

Abstract

N6-methyladenosine (m6A) and long non-coding RNA (lncRNA) have been associated with cancer prognosis and the effect of immunotherapy. However, the roles of m6A-related lncRNAs in the prognosis and immunotherapy in lung adenocarcinoma (LUAD) patients remain unclear. We evaluated the m6A modification patterns of 695 samples based on m6A regulators, and prognostic m6A-related lncRNAs were identified via a weighted gene co-expression network analysis. Twelve abnormal m6A regulators and nine prognostic lncRNAs were identified. The tumor microenvironment cell-infiltrating characteristics of three m6A-related lncRNA clusters were highly consistent with the three immune phenotypes of tumors, including immune-excluded, immune-inflamed and immune-desert phenotypes. The lncRNA score system was established, and high lncRNA score patients were associated with better overall survival. The lncRNA score was correlated with the expression of the immune checkpoints. Two immunotherapy cohorts supported that the high lncRNA score enhanced the response to anti-PD-1/L1 immunotherapy and was remarkably correlated with the inflamed immune phenotype, showing significant therapeutic advantages and clinical benefits. Furthermore, the patients with high lncRNA scores were more sensitive to erlotinib and axitinib. The lncRNA score was associated with the expression of miRNA and the regulation of post-transcription. We constructed an applied lncRNA score-system to identify eligible LUAD patients for immunotherapy and predict the sensitivity to chemotherapeutic drugs.

摘要

N6-甲基腺苷(m6A)和长链非编码 RNA(lncRNA)与癌症预后和免疫治疗的效果有关。然而,m6A 相关 lncRNA 在肺腺癌(LUAD)患者中的预后和免疫治疗中的作用尚不清楚。我们基于 m6A 调节因子评估了 695 个样本的 m6A 修饰模式,并通过加权基因共表达网络分析确定了预后相关的 m6A 相关 lncRNA。鉴定出 12 个异常 m6A 调节因子和 9 个预后 lncRNA。三个 m6A 相关 lncRNA 聚类的肿瘤微环境细胞浸润特征与肿瘤的三种免疫表型高度一致,包括免疫排斥、免疫炎症和免疫荒漠表型。建立了 lncRNA 评分系统,高 lncRNA 评分患者的总生存率更好。lncRNA 评分与免疫检查点的表达相关。两个免疫治疗队列支持高 lncRNA 评分增强对抗 PD-1/L1 免疫治疗的反应,并且与炎症免疫表型显著相关,显示出显著的治疗优势和临床获益。此外,高 lncRNA 评分的患者对厄洛替尼和阿昔替尼更敏感。lncRNA 评分与 miRNA 的表达和转录后调控有关。我们构建了一个应用 lncRNA 评分系统来识别适合免疫治疗的 LUAD 患者,并预测对化疗药物的敏感性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a3e/9368324/1b9c07001a65/cells-11-02399-g002.jpg

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