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比较转录组分析揭示盐胁迫下的活性氧清除系统。

Comparative transcriptome analysis unveiling reactive oxygen species scavenging system of under salinity stress.

作者信息

Zhou Yan, Wen Lizhen, Liao Lixian, Lin Shuangmei, Zheng Enting, Li Yin, Zhang Ying

机构信息

Mangrove Institute, Lingnan Normal University, Zhanjiang, China.

出版信息

Front Plant Sci. 2022 Jul 25;13:953450. doi: 10.3389/fpls.2022.953450. eCollection 2022.

Abstract

Many mangrove forests have undergone major changes as a result of human activity and global climate change. is a common tree located in inner mangroves, and its range extends inland along tidal creeks, as far as the influence of salinity extends. This study investigated the physiological and molecular response mechanisms of by analyzing its antioxidant defense capacity, including its differentially expressed genes (DEGs) under similar salt stress conditions. Salt treatment significantly affected the osmoprotectants and lipid peroxidation in seedlings, which increased proline (Pro) content by 31.01-54.90% during all sample periods and decreased malonaldehyde (MDA) content by 12.81 and 18.17% at 25 and 40 days under 3.0% NaCl treatment. Antioxidant enzyme activities increased significantly following 3.0% NaCl treatment. Transcriptome analysis following assembly showed 26,498 matched unigenes. The results showed that 1,263 DEGs responded to transcription factors (TFs) and plant phytohormones and mediated oxidoreductase activity to scavenge reactive oxygen species (ROS) in the control vs. 3.0% NaCl comparison. In addition, the transcription levels of genes associated with auxin and ethylene signal transduction also changed. Under salt stress, ROS scavenging genes (, , and ) and part of AP2, MYB, NAC, C2C2, bHLH, and WRKY TFs were upregulated. This study identified important pathways and candidate genes involved in salinity tolerance and provided suggestions for further research into the mechanisms of salt tolerance in .

摘要

由于人类活动和全球气候变化,许多红树林发生了重大变化。[具体树种名称未给出]是一种常见于内陆红树林的树木,其分布范围沿着潮汐小溪向内陆延伸,直至盐度影响的范围。本研究通过分析其抗氧化防御能力,包括在相似盐胁迫条件下的差异表达基因(DEGs),来研究[具体树种名称未给出]的生理和分子响应机制。盐处理显著影响了[具体树种名称未给出]幼苗中的渗透保护剂和脂质过氧化作用,在3.0% NaCl处理下,在所有采样期脯氨酸(Pro)含量增加了31.01 - 54.90%,在25天和40天时丙二醛(MDA)含量分别降低了12.81%和18.17%。3.0% NaCl处理后抗氧化酶活性显著增加。组装后的转录组分析显示有26,498个匹配的单基因。结果表明,在对照与3.0% NaCl比较中,1263个DEGs对转录因子(TFs)和植物激素作出响应,并介导氧化还原酶活性以清除活性氧(ROS)。此外,与生长素和乙烯信号转导相关的基因转录水平也发生了变化。在盐胁迫下,ROS清除基因([具体基因名称未给出]、[具体基因名称未给出]和[具体基因名称未给出])以及部分AP2、MYB、NAC、C2C2、bHLH和WRKY转录因子上调。本研究确定了参与[具体树种名称未给出]耐盐性的重要途径和候选基因,并为进一步研究[具体树种名称未给出]的耐盐机制提供了建议。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c77/9358527/02c9111f8ec3/fpls-13-953450-g001.jpg

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