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uORF 介导的 ATF4 翻译调控可作为一种进化上保守的机制,促进非小细胞肺癌 (NSCLC) 和应激反应。

uORF-Mediated Translational Regulation of ATF4 Serves as an Evolutionarily Conserved Mechanism Contributing to Non-Small-Cell Lung Cancer (NSCLC) and Stress Response.

机构信息

Department of Radiotherapy, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.

出版信息

J Mol Evol. 2022 Oct;90(5):375-388. doi: 10.1007/s00239-022-10068-y. Epub 2022 Aug 13.

Abstract

Diseases and environmental stresses are two distinct challenges for virtually all living organisms. In light of evolution, cellular responses to diseases and stresses might share similar molecular mechanisms, but the detailed regulation pathway is not reported yet.We obtained the transcriptomes and translatomes from several NSCLC (non-small-cell lung cancer) patients as well as from different species under normal or stress conditions. We found that the translation level of gene ATF4 is remarkably enhanced in NSCLC due to the reduced number of ribosomes binding to its upstream open reading frames (uORFs). We also showed the evolutionary conservation of this uORF-ATF4 regulation in the stress response of other species. Molecular experiments showed that knockdown of ATF4 reduced the cell growth rate while overexpression of ATF4 enhanced cell growth, especially for the ATF4 allele with mutated uORFs. Population genetics analyses in multiple species verified that the mutations that abolish uATGs (start codon of uORFs) are highly deleterious, suggesting the functional importance of uORFs.Our study proposes an evolutionarily conserved pattern that enhances the ATF4 translation by uORFs upon stress or disease. We generalized the concept of cellular response to diseases and stresses. These two biological processes may share similar molecular mechanisms.

摘要

疾病和环境压力是几乎所有生物都面临的两个截然不同的挑战。从进化的角度来看,细胞对疾病和压力的反应可能具有相似的分子机制,但详细的调节途径尚未报道。我们从几个非小细胞肺癌 (NSCLC) 患者以及正常或应激条件下的不同物种中获得了转录组和翻译组。我们发现,由于结合到其上游开放阅读框 (uORFs) 的核糖体数量减少,ATF4 基因的翻译水平在 NSCLC 中显著增强。我们还展示了这种 uORF-ATF4 调节在其他物种应激反应中的进化保守性。分子实验表明,ATF4 的敲低降低了细胞生长速度,而过表达 ATF4 则增强了细胞生长,尤其是对于具有突变 uORFs 的 ATF4 等位基因。在多个物种中的群体遗传学分析证实,消除 uATGs(uORFs 的起始密码子)的突变是高度有害的,这表明 uORFs 的功能重要性。我们的研究提出了一种进化上保守的模式,即在应激或疾病时通过 uORFs 增强 ATF4 的翻译。我们推广了细胞对疾病和压力的反应的概念。这两个生物学过程可能具有相似的分子机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d886/9375200/28400f547445/239_2022_10068_Fig1_HTML.jpg

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