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严重急性呼吸综合征冠状病毒2型(SARS-CoV-2)德尔塔变异株(B.1.617.2)的电荷传输特性

Charge transport properties of SARS-CoV-2 Delta variant (B.1.617.2).

作者信息

He Lijun, Xie Zhiyang, Long Xing, Zhang Chaopeng, He Chengyun, Zhao Boyang, Qi Fei, Zhang Nan

机构信息

The School of Optoelectronic Engineering, Chongqing University of Posts and Telecommunications, Chongqing 400065, China.

出版信息

Process Biochem. 2022 Oct;121:656-660. doi: 10.1016/j.procbio.2022.08.010. Epub 2022 Aug 10.

Abstract

The B.1.617.2 (Delta) variant of concern is causing a new wave of infections in many countries. In order to better understand the changes of the SARS-CoV-2 mutation at the genetic level, we selected six mutations in the S region of the Delta variant compared with the native SARS-CoV-2 and get the conductance information of these six short RNA oligonucleotides groups by construct RNA: DNA hybrids. The electronic characteristics are investigated by the combination of density functional theory and non-equilibrium Green's function formulation with decoherence. We found that conductance is very sensitive to small changes in virus sequence. Among the 6 mutations in the Delta S region, D950N shows the largest change in relative conductance, reaching a surprising 4104.75%. These results provide new insights into the Delta variant from the perspective of its electrical properties. This may be a new method to distinguish virus variation and possess great research prospects.

摘要

值得关注的B.1.617.2(德尔塔)变种正在许多国家引发新一轮感染。为了在基因水平上更好地理解严重急性呼吸综合征冠状病毒2(SARS-CoV-2)突变的变化,我们选取了德尔塔变种S区域相对于原始SARS-CoV-2的六个突变,并通过构建RNA:DNA杂交体获得这六个短RNA寡核苷酸组的电导信息。通过将密度泛函理论与具有退相干的非平衡格林函数公式相结合来研究电子特性。我们发现电导对病毒序列的微小变化非常敏感。在德尔塔S区域的6个突变中,D950N的相对电导变化最大,达到惊人的4104.75%。这些结果从电特性角度为德尔塔变种提供了新的见解。这可能是一种区分病毒变异的新方法,具有很大的研究前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/026f/9364919/95ba2fdf9966/ga1_lrg.jpg

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