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肝纤维化动力学的计算模拟。

Computational simulation of liver fibrosis dynamics.

机构信息

Department of Chemical System Engineering, University of Tokyo, Tokyo, Japan.

Institute of Medical Science, Tokyo Medical University, 6-1-1, Shinjuku, Tokyo, 160-0022, Japan.

出版信息

Sci Rep. 2022 Aug 18;12(1):14112. doi: 10.1038/s41598-022-18123-w.

Abstract

Liver fibrosis is a result of homeostasis breakdown caused by repetitive injury. The accumulation of collagens disrupts liver structure and function, which causes serious consequences such as cirrhosis. Various mathematical simulation models have been developed to understand these complex processes. We employed the agent-based modelling (ABM) approach and implemented inflammatory processes in central venous regions. Collagens were individually modelled and visualised depending on their origin: myofibroblast and portal fibroblast. Our simulation showed that the administration of toxic compounds induced accumulation of myofibroblast-derived collagens in central venous regions and portal fibroblast-derived collagens in portal areas. Subsequently, these collagens were bridged between central-central areas and spread all over areas. We confirmed the consistent dynamic behaviour of collagen formulation in our simulation and from histological sections obtained via in vivo experiments. Sensitivity analyses identified dead hepatocytes caused by inflammation and the ratio of residential liver cells functioned as a cornerstone for the initiation and progression of liver fibrosis. The validated mathematical model demonstrated here shows virtual experiments that are complementary to biological experiments, which contribute to understanding a new mechanism of liver fibrosis.

摘要

肝纤维化是由反复损伤引起的内稳态破坏的结果。胶原的积累破坏了肝脏的结构和功能,导致肝硬化等严重后果。已经开发了各种数学模拟模型来理解这些复杂的过程。我们采用基于代理的建模(ABM)方法,并在中心静脉区域实施炎症过程。胶原根据其来源进行单独建模和可视化:肌成纤维细胞和门脉纤维母细胞。我们的模拟表明,有毒化合物的给药导致肌成纤维细胞衍生的胶原在中心静脉区域和门脉纤维母细胞衍生的胶原在门脉区域的积累。随后,这些胶原在中央-中央区域之间桥接,并扩散到所有区域。我们在模拟中以及通过体内实验获得的组织学切片中证实了胶原配方的一致动态行为。敏感性分析确定了炎症引起的死亡肝细胞和常驻肝细胞的比例是肝纤维化起始和进展的基石。这里验证的数学模型表明,虚拟实验是对生物实验的补充,有助于理解肝纤维化的新机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c181/9388486/80af0c238662/41598_2022_18123_Fig1_HTML.jpg

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本文引用的文献

1
Animal and Organoid Models of Liver Fibrosis.肝纤维化的动物和类器官模型
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Molecular and cellular mechanisms of liver fibrosis and its regression.肝纤维化及其逆转的分子和细胞机制。
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Shared and distinct mechanisms of fibrosis.纤维化的共同和独特机制。
Nat Rev Rheumatol. 2019 Dec;15(12):705-730. doi: 10.1038/s41584-019-0322-7. Epub 2019 Nov 11.

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