First School of Clinical Medicine, Shandong University of Traditional Chinese Medicine, Jinan, China.
Institute for Literature and Culture of Chinese Medicine, Shandong University of Traditional Chinese Medicine, Jinan, China.
Medicine (Baltimore). 2022 Aug 19;101(33):e30102. doi: 10.1097/MD.0000000000030102.
Heart failure (HF) is the end stage of the development of heart disease, whose prognosis is poor. The previous research of our team indicated that the formulae containing Aconiti Lateralis Radix Praeparata and Lepidii Semen Descurainiae Semen (ALRP-LSDS) could inhibit myocardial hypertrophy, inhibit cardiomyocyte apoptosis, delay myocardial remodeling (REM), and improve the prognosis of patients with HF effectively. In order to explore the mechanism of ALRP-LSDS for the treatment of HF, a combined approach of network pharmacology and molecular docking was conducted.
Public database TCMSP was used to screen the active compounds of ALRP-LSDS. The targets of screened active compounds were obtained from the TCMSP database and predicted using the online analysis tool PharmMapper. The targets of HF were obtained from 6 databases including GeneCards, OMIM, DrugBank, TTD, PharmGKB, and DisGeNET. Protein-protein interaction and enrichment analysis were performed, respectively, by STRING and Metascape online tools after merging the targets of active compounds and HF. Cytoscape software was used to conduct networks. Finally, molecular docking was performed by Vina to verify the correlation between key targets and active compounds.
Final results indicated that the active compounds including β-sitosterol, isorhamnetin, quercetin, kaempferol, and (R)-norcoclaurine, the targets including AKT1, CASP3, and MAPK1 might be the main active compounds and key targets of ALRP-LSDS for the treatment of HF separately. The binding ability of AKT1 to the main active compounds was better compared with the other 2 key targets, which means it might be more critical. The pathways including AGE-RAGE signaling pathway in diabetic complications, Pathways in cancer, and Fluid shear stress and atherosclerosis might play important roles in the treatment of HF with ALRP-LSDS. In general, ALRP-LSDS could inhibit cardiomyocyte apoptosis, delay REM, and improve cardiac function through multicompound, multitarget, and multipathway, which contributes to the treatment of HF.
Based on the combined approach of network pharmacology and molecular docking, this study screened out the main active compounds, key targets, and main pathways of ALRP-LSDS for the treatment of HF, and revealed its potential mechanisms, providing a theoretical basis for further research.
心力衰竭(HF)是心脏病发展的终末阶段,预后不良。本团队之前的研究表明,包含制川乌和萹蓄的方剂可以抑制心肌肥大、抑制心肌细胞凋亡、延缓心肌重构(REM),并有效改善 HF 患者的预后。为了探讨 ALRP-LSDS 治疗 HF 的机制,采用网络药理学和分子对接相结合的方法。
利用公共数据库 TCMSP 筛选 ALRP-LSDS 的活性化合物。从 TCMSP 数据库中获取筛选出的活性化合物的靶点,并使用在线分析工具 PharmMapper 进行预测。从 GeneCards、OMIM、DrugBank、TTD、PharmGKB 和 DisGeNET 等 6 个数据库中获取 HF 的靶点。合并活性化合物和 HF 的靶点后,分别使用 STRING 和 Metascape 在线工具进行蛋白质-蛋白质相互作用和富集分析。使用 Cytoscape 软件构建网络。最后,使用 Vina 进行分子对接,以验证关键靶点与活性化合物之间的相关性。
最终结果表明,β-谷甾醇、异鼠李素、槲皮素、山奈酚和(R)-去甲乌药碱等活性化合物,AKT1、CASP3 和 MAPK1 等靶点可能分别是 ALRP-LSDS 治疗 HF 的主要活性化合物和关键靶点。与另外 2 个关键靶点相比,AKT1 与主要活性化合物的结合能力更好,这意味着它可能更为关键。AGE-RAGE 信号通路在糖尿病并发症、癌症途径以及流体切应力和动脉粥样硬化等途径可能在 ALRP-LSDS 治疗 HF 中发挥重要作用。总的来说,ALRP-LSDS 通过多成分、多靶点和多途径抑制心肌细胞凋亡、延缓 REM、改善心功能,从而治疗 HF。
基于网络药理学和分子对接相结合的方法,本研究筛选出 ALRP-LSDS 治疗 HF 的主要活性化合物、关键靶点和主要途径,揭示了其潜在机制,为进一步研究提供了理论依据。