Shimell MaryJane, O'Connor Michael B
University of Minnesota.
MicroPubl Biol. 2022 Aug 3;2022. doi: 10.17912/micropub.biology.000611. eCollection 2022.
The steroid hormone 20-hydroxyecdysone (20E) is essential for proper development and the timing of intermediary stage transitions in insects. As a result, there is intense interest in identifying and defining the roles of the enzymes and signaling pathways that regulate 20E production in the prothoracic gland (PG), the major endocrine organ of juvenile insect phases. Transcriptomics is one powerful tool that has been used to identify novel genes that are up- or down-regulated in the PG which may contribute to 20E regulation. Additional functional characterization of putative regulatory candidate genes typically involves qRT-PCR and/or RNAi mediated knockdown of the candidate mRNA in the PG to assess whether the gene's expression shows temporal regulation in the PG and whether its expression is essential for proper 20E production and the correct timing of developmental transitions. While these methods have proved fruitful for identifying novel regulators of 20E production, characterizing the null phenotype of putative regulatory genes is the gold standard for assigning gene function since RNAi is known to generate various types of "off target" effects. Here we describe the genetic null mutant phenotype of the gene was originally identified as a differentially regulated gene in a PG microarray screen and assigned a place in the "Black Box" step of the E biosynthetic pathway based on RNAi mediated knockdown phenotypes and rescue experiments involving feeding of various intermediate compounds of the E biosynthetic pathway. In contrast, we find that Crispr generated null mutations in are viable and have normal developmental timing. Therefore, we conclude that Cyp6t3 is not required for E production under typical lab growth conditions and therefore is not an obligate enzymatic component of the Black Box.
类固醇激素20-羟基蜕皮酮(20E)对于昆虫的正常发育以及中间阶段转变的时间安排至关重要。因此,人们对鉴定和定义调节前胸腺(PG)中20E产生的酶和信号通路的作用有着浓厚的兴趣,前胸腺是幼年昆虫阶段的主要内分泌器官。转录组学是一种强大的工具,已被用于鉴定PG中上调或下调的新基因,这些基因可能有助于20E的调节。对假定的调控候选基因进行额外的功能表征通常涉及qRT-PCR和/或RNAi介导的PG中候选mRNA的敲低,以评估该基因的表达在PG中是否显示出时间调控,以及其表达对于正确的20E产生和发育转变的正确时间是否至关重要。虽然这些方法已被证明在鉴定20E产生的新调节因子方面卓有成效,但表征假定调控基因的无效表型是确定基因功能的金标准,因为已知RNAi会产生各种类型的“脱靶”效应。在这里,我们描述了基因的遗传无效突变体表型,该基因最初在PG微阵列筛选中被鉴定为差异调节基因,并根据RNAi介导的敲低表型以及涉及喂食E生物合成途径的各种中间化合物的拯救实验,在E生物合成途径的“黑箱”步骤中被定位。相比之下,我们发现通过Crispr产生的基因无效突变是可行的,并且发育时间正常。因此,我们得出结论,在典型的实验室生长条件下,E的产生不需要Cyp6t3,因此它不是黑箱中必不可少的酶成分。