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利用非专业众包来分割多色眼底图像的视杯和视盘。

Leveraging non-expert crowdsourcing to segment the optic cup and disc of multicolor fundus images.

作者信息

Zhang Jichang, Zheng Yuanjie, Hou Wanchen, Jiao Wanzhen

机构信息

School of Information Science & Engineering, Shandong Normal University, No. 1 Daxue Road, Changqing District, Jinan 250358, China.

Department of Ophthalmology, Shandong Provincial Hospital Affiliated to Shandong University, No. 324, Jingwuwei Seventh Road, Huaiyin District, Jinan 250021, China.

出版信息

Biomed Opt Express. 2022 Jun 17;13(7):3967-3982. doi: 10.1364/BOE.461775. eCollection 2022 Jul 1.

Abstract

Multicolor scanning laser imaging (MCI) images have broad application potential in the diagnosis of fundus diseases such as glaucoma. However, the performance level of automatic aided diagnosis systems based on MCI images is limited by the lack of high-quality annotations of numerous images. Producing annotations for vast amounts of MCI images will be a prolonged process if we only employ experts. Therefore, we consider non-expert crowdsourcing, which is an alternative approach to produce useful annotations efficiently and low cost. In this work, we aim to explore the effectiveness of non-expert crowdsourcing on the segmentation of the optic cup (OC) and optic disc (OD), which is an upstream task for glaucoma diagnosis, using MCI images. To this end, desensitized MCI images are independently annotated by four non-expert annotators, constructing a crowdsourcing dataset. To profit from crowdsourcing, we propose a model consisting of coupled regularization network and segmentation network. The regularization network generates learnable pixel-wise confusion matrices (CMs) that reflects preferences of each annotator. During training, the CMs and segmentation network are simultaneously optimized to enable dynamic trade-offs for non-expert annotations and generate reliable predictions. Crowdsourcing learning using our method have an average Mean Intersection Over Union ( ) of 91.34%, while the average of model trained by expert annotations is 91.72%. In addition, comparative experiments show that in our segmentation task non-expert crowdsourcing can be on a par with the expert who annotates 90% of data. Our work suggests that crowdsourcing in the segmentation of OC and OD using MCI images has the potential to be a substitute to expert annotation, which will accelerate the construction of large datasets to facilitate the application of deep learning in clinical diagnosis using MCI images.

摘要

多色扫描激光成像(MCI)图像在青光眼等眼底疾病的诊断中具有广泛的应用潜力。然而,基于MCI图像的自动辅助诊断系统的性能水平受到大量图像缺乏高质量标注的限制。如果仅依靠专家为大量MCI图像生成标注,将是一个漫长的过程。因此,我们考虑非专家众包,这是一种能够高效且低成本地生成有用标注的替代方法。在这项工作中,我们旨在探索非专家众包在使用MCI图像进行视杯(OC)和视盘(OD)分割方面的有效性,视杯和视盘分割是青光眼诊断的上游任务。为此,由四名非专家标注员独立标注脱敏后的MCI图像,构建一个众包数据集。为了从众包中获益,我们提出了一个由耦合正则化网络和分割网络组成的模型。正则化网络生成反映每个标注员偏好的可学习的逐像素混淆矩阵(CMs)。在训练过程中,同时优化混淆矩阵和分割网络,以便为非专家标注进行动态权衡并生成可靠的预测。使用我们的方法进行众包学习的平均交并比( )为91.34%,而由专家标注训练的模型的平均交并比为91.72%。此外,对比实验表明,在我们的分割任务中,非专家众包可以与标注90%数据的专家相媲美。我们的工作表明,使用MCI图像进行OC和OD分割的众包有潜力替代专家标注,这将加速大型数据集的构建,以促进深度学习在MCI图像临床诊断中的应用。

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本文引用的文献

1
Learning From Noisy Labels With Deep Neural Networks: A Survey.
IEEE Trans Neural Netw Learn Syst. 2023 Nov;34(11):8135-8153. doi: 10.1109/TNNLS.2022.3152527. Epub 2023 Oct 27.
2
UNet++: A Nested U-Net Architecture for Medical Image Segmentation.
Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018). 2018 Sep;11045:3-11. doi: 10.1007/978-3-030-00889-5_1. Epub 2018 Sep 20.
3
CE-Net: Context Encoder Network for 2D Medical Image Segmentation.
IEEE Trans Med Imaging. 2019 Oct;38(10):2281-2292. doi: 10.1109/TMI.2019.2903562. Epub 2019 Mar 7.
4
CLINICAL APPLICATION OF MULTICOLOR IMAGING IN CENTRAL SEROUS CHORIORETINOPATHY.
Retina. 2020 Apr;40(4):743-749. doi: 10.1097/IAE.0000000000002441.
5
Automatic segmentation variability estimation with segmentation priors.
Med Image Anal. 2018 Dec;50:54-64. doi: 10.1016/j.media.2018.08.006. Epub 2018 Aug 26.
6
"Crowdsourcing" ten years in: A review.
J Glob Health. 2017 Dec;7(2):020602. doi: 10.7189/jogh.07.020602.
8
Clinical Application of Multicolor Imaging Technology.
Ophthalmologica. 2016;236(1):8-18. doi: 10.1159/000446857. Epub 2016 Jul 13.
9
Crowdsourcing as a screening tool to detect clinical features of glaucomatous optic neuropathy from digital photography.
PLoS One. 2015 Feb 18;10(2):e0117401. doi: 10.1371/journal.pone.0117401. eCollection 2015.
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Med Image Comput Comput Assist Interv. 2014;17(Pt 2):438-45. doi: 10.1007/978-3-319-10470-6_55.

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