Suppr超能文献

多重耐药金黄色葡萄球菌NCTC 6571-UB实验室菌株的基因组序列草图

Draft Genome Sequence of a Multiple Antibiotic Resistant Staphylococcus aureus NCTC 6571-UB Laboratory Strain.

作者信息

Norton Paul, Chua Kah-Ooi, Katsikogianni Maria, Thornton M Julie, Chan Kok-Gan, Chang Chien-Yi

机构信息

Centre for Skin Sciences, Faculty of Life Sciences, University of Bradford, Bradford, United Kingdom.

Centre for Research in Biotechnology for Agriculture, University of Malaya, Kuala Lumpur, Malaysia.

出版信息

Microbiol Resour Announc. 2022 Sep 15;11(9):e0044822. doi: 10.1128/mra.00448-22. Epub 2022 Aug 23.

Abstract

We report the draft genome sequence of the laboratory strain Staphylococcus aureus NCTC 6571-UB, a strain that was derived from S. aureus NCTC 6571. This strain was selected for sequencing in order to provide information on the genome dynamics and the acquired resistance genes for penicillin G, trimethoprim, and sulfamethoxazole resistance.

摘要

我们报告了实验室菌株金黄色葡萄球菌NCTC 6571 - UB的基因组序列草图,该菌株源自金黄色葡萄球菌NCTC 6571。选择该菌株进行测序是为了提供有关基因组动态以及青霉素G、甲氧苄啶和磺胺甲恶唑耐药性的获得性耐药基因的信息。

相似文献

1
Draft Genome Sequence of a Multiple Antibiotic Resistant Staphylococcus aureus NCTC 6571-UB Laboratory Strain.
Microbiol Resour Announc. 2022 Sep 15;11(9):e0044822. doi: 10.1128/mra.00448-22. Epub 2022 Aug 23.
4
Draft Genome Sequence of the Multiple Antibiotic Resistant Pseudomonas aeruginosa PAO1-UB Subline.
Microbiol Resour Announc. 2022 Sep 15;11(9):e0064622. doi: 10.1128/mra.00646-22. Epub 2022 Aug 22.
5
Revisiting the genomes of the Staphylococcus aureus strains NCTC 8325 and RN4220.
Int J Med Microbiol. 2012 Mar;302(2):84-7. doi: 10.1016/j.ijmm.2012.01.002. Epub 2012 Mar 12.
6
Draft genome sequence of a human-associated streptogramin-resistant Staphylococcus aureus.
J Glob Antimicrob Resist. 2019 Mar;16:72-73. doi: 10.1016/j.jgar.2018.11.021. Epub 2018 Dec 12.
8
Draft genome sequence of multidrug-resistant Staphylococcus haemolyticus IPK_TSA25 harbouring a Staphylococcus aureus plasmid, pS0385-1.
J Glob Antimicrob Resist. 2017 Dec;11:8-9. doi: 10.1016/j.jgar.2017.08.010. Epub 2017 Sep 1.
9
Isolation and first draft genome sequence of a linezolid-dependent clinical strain.
Future Microbiol. 2020 Aug;15:1123-1129. doi: 10.2217/fmb-2020-0068.
10
Generation of a vancomycin-intermediate Staphylococcus aureus (VISA) strain by two amino acid exchanges in VraS.
J Antimicrob Chemother. 2014 Dec;69(12):3190-8. doi: 10.1093/jac/dku297. Epub 2014 Aug 6.

引用本文的文献

1
Genome sequence of multi-drug-resistant isolated from a clinical sample collected in Maroua, Cameroon.
Microbiol Resour Announc. 2024 Nov 12;13(11):e0065624. doi: 10.1128/mra.00656-24. Epub 2024 Sep 30.

本文引用的文献

1
Using SPAdes De Novo Assembler.
Curr Protoc Bioinformatics. 2020 Jun;70(1):e102. doi: 10.1002/cpbi.102.
2
The Structural and Functional Basis for Recurring Sulfa Drug Resistance Mutations in Dihydropteroate Synthase.
Front Microbiol. 2018 Jul 17;9:1369. doi: 10.3389/fmicb.2018.01369. eCollection 2018.
3
NCBI prokaryotic genome annotation pipeline.
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
4
OrthoANI: An improved algorithm and software for calculating average nucleotide identity.
Int J Syst Evol Microbiol. 2016 Feb;66(2):1100-1103. doi: 10.1099/ijsem.0.000760. Epub 2015 Nov 9.
5
Phage Conversion for β-Lactam Antibiotic Resistance of Staphylococcus aureus from Foods.
J Microbiol Biotechnol. 2016 Feb;26(2):263-9. doi: 10.4014/jmb.1508.08042.
6
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
Bioinformatics. 2015 Oct 1;31(19):3210-2. doi: 10.1093/bioinformatics/btv351. Epub 2015 Jun 9.
7
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
8
Prokka: rapid prokaryotic genome annotation.
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
9
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
10
Genome sequence-based species delimitation with confidence intervals and improved distance functions.
BMC Bioinformatics. 2013 Feb 21;14:60. doi: 10.1186/1471-2105-14-60.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验