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意大利一貂场的 SARS-CoV-2:病例描述,通过比较不同检测方法的分子和血清学诊断。

SARS-CoV-2 in a Mink Farm in Italy: Case Description, Molecular and Serological Diagnosis by Comparing Different Tests.

机构信息

Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, IZSLER, Via Bianchi, 9, 25124 Brescia, Italy.

Direzione Generale Welfare, Regione Lombardia, Piazza Città di Lombardia 1, 20124 Milano, Italy.

出版信息

Viruses. 2022 Aug 8;14(8):1738. doi: 10.3390/v14081738.

DOI:10.3390/v14081738
PMID:36016360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9415545/
Abstract

This study described a SARS-CoV-2 infection in minks on an Italian farm. Surveillance was performed based on clinical examination and a collection of 1879 swabs and 74 sera from dead and live animals. The farm was placed under surveillance for 4.5 months, from the end of July 2020, when a man working on the farm tested positive by RT-PCR, till mid-December 2020 when all the animals were sacrificed. Clinical examination revealed no clinical signs or increased mortality rates attributable to SARS-CoV-2, while diagnostic tests detected only four weak PCR-positive samples, but 100% of sera were positive for SARS-CoV-2 anti-S antibodies. The phylogenetic analysis of two SARS-CoV-2 sequences from two minks and the sequence of the worker showed that they belonged to different clades. It could be therefore assumed that two distinct introductions of the virus occurred on the farm, and that the first introduction probably occurred before the start of the surveillance period. From the data collected, and especially from the detection of specific antibodies through the combination of different tests, it can be postulated that syndromic surveillance combined with genome detection by PCR may not be sufficient to achieve a diagnosis in asymptomatic animals. In particular, the serological approach, especially when using tests directed towards the S protein, may be useful for improving the traceability of virus circulation in similar environments.

摘要

本研究描述了意大利一家农场的水貂中发生的 SARS-CoV-2 感染。监测工作基于临床检查以及对来自死、活动物的 1879 个拭子和 74 份血清的采集进行。该农场从 2020 年 7 月底开始被监测,当时一名在农场工作的男子经 RT-PCR 检测呈阳性,一直持续到 2020 年 12 月中旬,所有动物都被处死。临床检查未发现归因于 SARS-CoV-2 的临床症状或死亡率增加,而诊断检测仅检测到四个 PCR 弱阳性样本,但 100%的血清对 SARS-CoV-2 抗 S 抗体呈阳性。对两只水貂和一名工人的两个 SARS-CoV-2 序列进行的系统发育分析表明,它们属于不同的分支。因此可以假设病毒在该农场发生了两次不同的传入,第一次传入可能发生在监测期开始之前。从收集的数据,特别是通过结合不同的检测方法检测到特异性抗体,可以推测综合征监测结合 PCR 进行基因组检测可能不足以对无症状动物进行诊断。特别是,血清学方法,特别是使用针对 S 蛋白的检测方法,可能有助于改善类似环境中病毒传播的可追溯性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/b62255a48c70/viruses-14-01738-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/f3959091bd6e/viruses-14-01738-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/58f394635e22/viruses-14-01738-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/fb0a2c2ec6a9/viruses-14-01738-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/b62255a48c70/viruses-14-01738-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/f3959091bd6e/viruses-14-01738-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/58f394635e22/viruses-14-01738-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/fb0a2c2ec6a9/viruses-14-01738-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5720/9415545/b62255a48c70/viruses-14-01738-g004.jpg

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