Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Vira Pioneers of Modern Science (VIPOMC), Tehran, Iran.
Hum Genomics. 2022 Aug 26;16(1):33. doi: 10.1186/s40246-022-00394-z.
The tripartite motif containing (TRIM)-22 participates in innate immune responses and exhibits antiviral activities. The present study aimed to assess of the relationship between TRIM22 single-nucleotide polymorphisms and clinical parameters with the coronavirus disease 2019 (COVID-19) infection severity.
TRIM22 polymorphisms (rs7113258, rs7935564, and rs1063303) were genotyped using TaqMan polymerase chain reaction (PCR) assay in 495 dead and 497 improved severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-positive patients.
In this study, the frequencies of TRIM22 rs1063303 GG, rs7935564 GG, and rs7113258 TT were significantly higher in dead patients than in improved patients, and higher viral load with low PCR Ct value was noticed in dead patients. The multivariate logistic regression analysis revealed that the lower levels of low-density lipoprotein (LDL), cholesterol, PCR Ct value, and lower 25-hydroxyvitamin D, and also higher levels of erythrocyte sedimentation rate (ESR), C-reactive protein (CRP), and TRIM22 rs1063303 GG, rs7113258 TT, and rs3824949 GG genotypes were related to the COVID-19 infection severity.
Our finding proved the probable relationship between the COVID-19 infection severity with the genotypes of TRIM22 SNPs and clinical parameters. More research is required worldwide to show the association between the COVID-19 infection severity and host genetic factors.
包含三部分基序的 (TRIM)-22 参与先天免疫反应,并表现出抗病毒活性。本研究旨在评估 TRIM22 单核苷酸多态性与冠状病毒病 2019(COVID-19)感染严重程度的临床参数之间的关系。
采用 TaqMan 聚合酶链反应(PCR)法检测 495 例死亡和 497 例改善的严重急性呼吸综合征冠状病毒 2(SARS-CoV-2)阳性患者的 TRIM22 多态性(rs7113258、rs7935564 和 rs1063303)。
本研究中,死亡患者 TRIM22 rs1063303 GG、rs7935564 GG 和 rs7113258 TT 的频率明显高于改善患者,且死亡患者的病毒载量较低,PCR Ct 值较低。多变量 logistic 回归分析显示,低密度脂蛋白(LDL)、胆固醇、PCR Ct 值较低,25-羟维生素 D 水平较低,红细胞沉降率(ESR)、C 反应蛋白(CRP)水平较高,TRIM22 rs1063303 GG、rs7113258 TT 和 rs3824949 GG 基因型较低与 COVID-19 感染严重程度有关。
我们的研究结果证明了 COVID-19 感染严重程度与 TRIM22 SNP 基因型和临床参数之间可能存在的关系。需要在全球范围内进行更多的研究,以显示 COVID-19 感染严重程度与宿主遗传因素之间的关联。