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基于结构的药物设计的实验技术进展。

Evolving Experimental Techniques for Structure-Based Drug Design.

机构信息

Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, United States.

School of Applied and Engineering Physics, Cornell University, Ithaca, New York 14853, United States.

出版信息

J Phys Chem B. 2022 Sep 8;126(35):6599-6607. doi: 10.1021/acs.jpcb.2c04344. Epub 2022 Aug 27.

Abstract

Structure-based drug design (SBDD) is a prominent method in rational drug development and has traditionally benefitted from the atomic models of protein targets obtained using X-ray crystallography at cryogenic temperatures. In this perspective, we highlight recent advances in the development of structural techniques that are capable of probing dynamic information about protein targets. First, we discuss advances in the field of X-ray crystallography including serial room-temperature crystallography as a method for obtaining high-resolution conformational dynamics of protein-inhibitor complexes. Next, we look at cryogenic electron microscopy (cryoEM), another high-resolution technique that has recently been used to study proteins and protein complexes that are too difficult to crystallize. Finally, we present small-angle X-ray scattering (SAXS) as a potential high-throughput screening tool to identify inhibitors that target protein complexes and protein oligomerization.

摘要

基于结构的药物设计(SBDD)是一种重要的合理药物开发方法,传统上受益于低温下使用 X 射线晶体学获得的蛋白质靶标的原子模型。在这篇观点文章中,我们强调了开发能够探测蛋白质靶标动态信息的结构技术的最新进展。首先,我们讨论了 X 射线晶体学领域的进展,包括连续室温晶体学作为获得蛋白质-抑制剂复合物高分辨率构象动力学的方法。接下来,我们研究了低温电子显微镜(cryoEM),这是另一种高分辨率技术,最近已被用于研究难以结晶的蛋白质和蛋白质复合物。最后,我们提出了小角 X 射线散射(SAXS)作为一种潜在的高通量筛选工具,用于识别针对蛋白质复合物和蛋白质寡聚化的抑制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0d70/10161966/f0086ec3700b/nihms-1892332-f0001.jpg

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