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微小RNA-疾病网络分析为甲氨蝶呤重新定位用于治疗小鼠腹主动脉瘤。

MicroRNA-disease Network Analysis Repurposes Methotrexate for the Treatment of Abdominal Aortic Aneurysm in Mice.

作者信息

Shen Yicong, Gao Yuanxu, Shi Jiangcheng, Huang Zhou, Dai Rongbo, Fu Yi, Zhou Yuan, Kong Wei, Cui Qinghua

机构信息

Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing 100191, China.

Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Peking University, Beijing 100191, China; State Key Laboratory of Lunar and Planetary Sciences, Macau University of Science and Technology, Macao Special Administrative Region 999078, China; Department of Biomedical Informatics, Center for Noncoding RNA Medicine, School of Basic Medical Sciences, Peking University, Beijing 100191, China.

出版信息

Genomics Proteomics Bioinformatics. 2023 Oct;21(5):1030-1042. doi: 10.1016/j.gpb.2022.08.002. Epub 2022 Aug 24.

Abstract

Abdominal aortic aneurysm (AAA) is a permanent dilatation of the abdominal aorta and is highly lethal. The main purpose of the current study is to search for noninvasive medical therapies for AAA, for which there is currently no effective drug therapy. Network medicine represents a cutting-edge technology, as analysis and modeling of disease networks can provide critical clues regarding the etiology of specific diseases and therapeutics that may be effective. Here, we proposed a novel algorithm to quantify disease relations based on a large accumulated microRNA-disease association dataset and then built a disease network covering 15 disease classes and 304 diseases. Analysis revealed some patterns for these diseases. For instance, diseases tended to be clustered and coherent in the network. Surprisingly, we found that AAA showed the strongest similarity with rheumatoid arthritis and systemic lupus erythematosus, both of which are autoimmune diseases, suggesting that AAA could be one type of autoimmune diseases in etiology. Based on this observation, we further hypothesized that drugs for autoimmune diseases could be repurposed for the prevention and therapy of AAA. Finally, animal experiments confirmed that methotrexate, a drug for autoimmune diseases, was able to alleviate the formation and development of AAA.

摘要

腹主动脉瘤(AAA)是腹主动脉的永久性扩张,具有很高的致死率。本研究的主要目的是寻找针对AAA的非侵入性医学疗法,目前尚无有效的药物治疗方法。网络医学是一项前沿技术,因为疾病网络的分析和建模可以为特定疾病的病因和可能有效的治疗方法提供关键线索。在此,我们提出了一种基于大量累积的微小RNA-疾病关联数据集来量化疾病关系的新算法,然后构建了一个涵盖15个疾病类别和304种疾病的疾病网络。分析揭示了这些疾病的一些模式。例如,疾病在网络中倾向于聚集和连贯。令人惊讶的是,我们发现AAA与类风湿性关节炎和系统性红斑狼疮表现出最强的相似性,这两种疾病都是自身免疫性疾病,表明AAA在病因上可能是一种自身免疫性疾病。基于这一观察结果,我们进一步假设自身免疫性疾病的药物可以重新用于预防和治疗AAA。最后,动物实验证实,一种用于自身免疫性疾病的药物甲氨蝶呤能够减轻AAA的形成和发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a31/10928436/6d48a2b95602/gr1.jpg

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