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刘、赵和庄1977年发表的台湾特有物种的完整叶绿体基因组及系统发育分析

Complete chloroplast genome and phylogenetic analysis of Liu, Chao, and Chuang, 1977: an endemic species in Taiwan.

作者信息

Huang Chi-Chun, Huang Chao-Li, Hsu Tsai-Wen, Chang Li-Hui, Hung Kuo-Hsiang, Wang Wei-Kuang

机构信息

Endemic Species Research Institute, Jiji, Nantou, Taiwan.

Institute of Tropical Plant Sciences and Microbiology, National Cheng Kung University, Tainan, Taiwan.

出版信息

Mitochondrial DNA B Resour. 2022 Aug 22;7(8):1507-1509. doi: 10.1080/23802359.2022.2082892. eCollection 2022.

Abstract

Liu, Chao, and Chuang is an endemic and endangered herb in Taiwan. In this study, the complete circular chloroplast genome of was reconstructed and annotated using Illumina sequencing. The genome size of is 155,938 bp, including a pair of inverted repeat regions (IRs: 26308 bp), separated by a large single-copy (LSC) region of 85,784 bp and a small single-copy (SSC) region of 17,538 bp. The GC content of the chloroplast genome is 37.6%. There are 113 different genes in the chloroplast genome of , including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. A maximum-likelihood phylogenetic analysis showed that species is the monophyletic group, and belongs to subgenus and is closely related to

摘要

刘氏柴胡是台湾地区的一种特有且濒危的草本植物。在本研究中,利用Illumina测序技术对其完整的环状叶绿体基因组进行了重建和注释。其基因组大小为155,938 bp,包括一对反向重复区域(IRs:26308 bp),被一个85,784 bp的大单拷贝(LSC)区域和一个17,538 bp的小单拷贝(SSC)区域隔开。叶绿体基因组的GC含量为37.6%。其叶绿体基因组中有113个不同的基因,包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。最大似然系统发育分析表明,该物种是一个单系类群,且属于亚属,与……密切相关 。

需注意,原文中部分物种名缺失,翻译时按原样保留了英文表述。

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