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刘等人1961年(伞形科)的完整叶绿体基因组。

Complete chloroplast genome of Liu et al. 1961 (Apiaceae).

作者信息

Huang Chi-Chun, Hsu Tsai-Wen, Hung Kuo-Hsiang, Wang Wei-Kuang

机构信息

Taiwan Biodiversity Research Institute, Jiji, Nantou, Taiwan.

Graduate Institute of Bioresources, Pingtung University of Science and Technology, Pingtung, Taiwan.

出版信息

Mitochondrial DNA B Resour. 2024 Apr 5;9(4):470-474. doi: 10.1080/23802359.2024.2335992. eCollection 2024.

Abstract

Liu et al.1961, is a perennial herb in the Apiaceae family that is endemic to Taiwan. In this study, the complete circular chloroplast genome of was reconstructed and annotated using Illumina sequencing. The size of the chloroplast genome is 154,266 bp, consisting of two inverted repeats (IRs, 25,075 bp) separated by a large single-copy region (LSC, 86,569 bp) and a small single-copy region (SSC, 17,547 bp). The GC content of the chloroplast genome is 37.6%. There are 114 different genes in the chloroplast genome of , including 80 protein-coding genes, 30 tRNA genes and four rRNA genes. A maximum-likelihood phylogenetic analysis showed that forms a distinct clade, and separated from other species within the genus . This study provided insights into the evolutionary relationships among different species of .

摘要

Liu等人于1961年发现,它是伞形科的一种多年生草本植物,为台湾特有。在本研究中,利用Illumina测序技术重建并注释了其完整的环状叶绿体基因组。叶绿体基因组大小为154,266 bp,由两个反向重复序列(IRs,25,075 bp)组成,中间被一个大单拷贝区域(LSC,86,569 bp)和一个小单拷贝区域(SSC,17,547 bp)隔开。叶绿体基因组的GC含量为37.6%。其叶绿体基因组中有114个不同的基因,包括80个蛋白质编码基因、30个tRNA基因和4个rRNA基因。最大似然系统发育分析表明,它形成了一个独特的分支,并与该属内的其他物种分离。本研究为该属不同物种之间的进化关系提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13e1/11000599/1791ac225624/TMDN_A_2335992_F0001_C.jpg

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