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环状RNA_0061265通过上调极光激酶A(AURKA)的表达,竞争性结合微小RNA_885_3p,促进胃癌发展。

circ_0061265 competitively binds to microRNA-885-3p to promote the development of gastric cancer by upregulating AURKA expression.

作者信息

Fei Qian, Lin Yuhe, Zhang Mi, Guo Jinshuai, Liang Yuan

机构信息

Department of Oncology, Shengjing Hospital of China Medical University, Shenyang, 11021, People's Republic of China.

Department of General Surgery, The Fourth Affiliated Hospital of China Medical University, Shenyang, 110032, People's Republic of China.

出版信息

Cancer Cell Int. 2022 Sep 5;22(1):277. doi: 10.1186/s12935-022-02646-3.

Abstract

BACKGROUND

Circular RNAs (circRNAs) represent a class of newly identified transcripts that act as competing endogenous RNAs (ceRNAs) to modulate gene expression by competing for the shared microRNAs (miRNAs) in humans. In this study, we set out to investigate the role of the circRNA-miRNA-mRNA ceRNA network in gastric cancer (GC).

METHODS

A differential analysis on GC-related circRNAs, miRNAs and mRNAs was performed utilizing the R language "limma" package, followed by GO and KEGG enrichment analyses. The Cytoscape visualization software was used to construct the circRNA-miRNA-mRNA ceRNA network. RT-qPCR, Western blot assay, immunohistochemistry, RNA pull down, RIP and dual luciferase gene reporter assay were conducted to verify the expression of the related circRNA, miRNA and mRNA and their interaction in GC tissues and cells.

RESULTS

The bioinformatics analysis screened 13 circRNAs, 241 miRNAs and 7483 mRNAs related to GC. Ten DEmRNAs (AURKA, BUB1, CCNF, FEN1, FGF2, ITPKB, CDKN1A, TRIP13, KNTC1 and KIT) were identified from the constructed PPI network and module analysis, among which AURKA was the most critical. A circ_0061265-miRNA-885-3p-AURKA ceRNA network was constructed. In vitro cell experiment demonstrated significantly upregulated circ_0061265 and AURKA, but downregulated miR-885-3p in GC. Moreover, circ_0061265 promoted the occurrence of GC by competitively binding to miRNA-885-3p to regulate AURKA expression.

CONCLUSION

Our work validated that circ_0061265 may increase AURKA expression by competitively binding to miRNA-885-3p, thereby promoting GC development.

摘要

背景

环状RNA(circRNAs)是一类新发现的转录本,在人类中作为竞争性内源RNA(ceRNAs),通过竞争共享的微小RNA(miRNAs)来调节基因表达。在本研究中,我们旨在探究circRNA-miRNA-mRNA ceRNA网络在胃癌(GC)中的作用。

方法

利用R语言“limma”软件包对与GC相关的circRNAs、miRNAs和mRNAs进行差异分析,随后进行GO和KEGG富集分析。使用Cytoscape可视化软件构建circRNA-miRNA-mRNA ceRNA网络。通过RT-qPCR、蛋白质免疫印迹分析、免疫组织化学、RNA下拉、RNA免疫沉淀和双荧光素酶基因报告分析,验证相关circRNA、miRNA和mRNA在GC组织和细胞中的表达及其相互作用。

结果

生物信息学分析筛选出13个与GC相关的circRNAs、241个miRNAs和7483个mRNAs。从构建的蛋白质-蛋白质相互作用(PPI)网络和模块分析中鉴定出10个差异表达的mRNA(AURKA、BUB1、CCNF、FEN1、FGF2、ITPKB、CDKN1A、TRIP13、KNTC1和KIT),其中AURKA最为关键。构建了circ_0061265-miRNA-885-3p-AURKA ceRNA网络。体外细胞实验表明,在GC中circ_0061265和AURKA显著上调,但miR-885-3p下调。此外,circ_0061265通过竞争性结合miRNA-885-3p来调节AURKA表达,从而促进GC的发生。

结论

我们的研究证实,circ_0061265可能通过竞争性结合miRNA-885-3p增加AURKA表达,从而促进GC的发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae70/9446739/5ff5cf573472/12935_2022_2646_Fig9_HTML.jpg

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